Effector profile
| PlantPEAD ID: PlantPEAD33473 | Uniprot ID: U3NB47 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 914237 | Pathogen type: Fungi |
| Species: Rhynchosporium commune | Strain: | Other name: |
| Gene name: | NCBI Gene ID: KC968729 | |
| Entry name: U3NB47_9HELO | Protein name: NIP3 avirulence protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCTGCCCAAGACGTTAATCATTTGCCTGCTCGCAACTACAGCCCAAGCCGCATGCGGCGATGTTTACACGATCCAGGGTAACTGTACCATCAGAGATTACAAGTGCAAGTACCCTAGGGTACCATCATGCAACTCTAAGGGTGCATGCCCGTACCTGCACTTGTTCGACGTGCCAATTTTCTGCGATGAAGACAAAGACTGTGTTACCTCGTACAAATGTAACAAAAATTACAAGCGCTCCCCGCTGAACTTGGGCCCTTTCTATGAAGACGGAGACCTCGTGGCTAAAGAGGAAGGTGAAGGAGGGGAAGGTGATTCGGAACTGGTGGAGGAGGGTGATGAG
Protein sequence:
MLPKTLIICLLATTAQAACGDVYTIQGNCTIRDYKCKYPRVPSCNSKGACPYLHLFDVPIFCDEDKDCVTSYKCNKNYKRSPLNLGPFYEDGDLVAKEEGEGGEGDSELVEEGDE
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 12700.3 | 115 | 4.54 | -0.43 | 58.97 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: