Effector profile
| PlantPEAD ID: PlantPEAD33667 | Uniprot ID: A0A0U5FKD9 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 346 | Pathogen type: Bacteria |
| Species: Xanthomonas citri | Strain: pv. citri | Other name: |
| Gene name: Hpa | NCBI Gene ID: CCXZ01000188 | |
| Entry name: A0A0U5FKD9_XANCI | Protein name: Hpa1 protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TTACTGCATCGATCCGGTGTCGCTCGCAAGGCTGGTGCCGAGGCTGGTGCCGAGGCCGCCGCCGAAGCCACCACCAAAGCCGCCGCCGAAGCCACCACCATTCTGCGCCTGGAGAATGTCTCCGACGATATTCATCAGCATCTGGGTGTATTGCGAGGGGGAGCCGTTGGACTGACCGGCCTGCTGCCGATTGCCGCCCTGACCACCAGAGTCACCACCCTGGCCTTGACCCTGACCCTGCTCGGCATTGTTGCTCTGCTGAAGCAGGGCCATGATGAGCTGGGTCAGCAGCTGGTCCAGTTGCTTTTCCGAGATGCCCTGGTTGCCCTGGTTCGAACCAGATTGCGTGTTCTGGCTGGGGTCAACCTGAAAGAAGGACGAGTTGGCGCCGAGCTGTGTGTTCAAAGAATTCATCAT
Protein sequence:
MMNSLNTQLGANSSFFQVDPSQNTQSGSNQGNQGISEKQLDQLLTQLIMALLQQSNNAEQGQGQGQGGDSGGQGGNRQQAGQSNGSPSQYTQMLMNIVGDILQAQNGGGFGGGFGGGFGGGLGTSLGTSLASDTGSMQ
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 13878.9 | 138 | 3.85 | -0.591 | 42.9 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR048214
Pfam:
SMART:
KEGG: xcf:J172_00530,xcm:J164_00535,xcn:J169_00535,xcr:J163_00535,xcu:J159_00536,xcw:J162_00535
PRINTS: