Effector profile
| PlantPEAD ID: PlantPEAD33689 | Uniprot ID: Q0ZBC0 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 339 | Pathogen type: Bacteria |
| Species: Xanthomonas campestris | Strain: pv. malvacearum strain WHRI 5232 | Other name: |
| Gene name: | NCBI Gene ID: DQ643828 | |
| Entry name: Q0ZBC0_XANCM | Protein name: Hrp | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGAATTCTTTGAACACACAGATCGGCGCCAACTCGTCCTTCTTGCAGGTCGACCCGAGCCAGAACACGCAATTCGGTCCGAACCAGGGCAATCAAGGCATCTCGGAAAAGCAGCTGGACCAGCTGCTGACCCAGCTCATCATGGCCCTGCTTCAGCAGAGCAACAATGCCGACCAGGGTCAGGGTGGTGACTCTGGTGGTCAAGGCGGCAATTCGCGGCAGGCCGGGCAGCCCAATGGTTCCCCCTCGGCATACACCCAGATGCTGATGAATATCGTCGGAGACATTCTCCAGGCGCAGAATGGTGGTGGCTTCGGCGGCGGGTTCGGCGGTGGCTTTGGTGGCGGGCTCGGCACCAGCCTCGGCAGCAGCCTTGCGAGCGACACCGGATCGATGCAGTAA
Protein sequence:
MNSLNTQIGANSSFLQVDPSQNTQFGPNQGNQGISEKQLDQLLTQLIMALLQQSNNADQGQGGDSGGQGGNSRQAGQPNGSPSAYTQMLMNIVGDILQAQNGGGFGGGFGGGFGGGLGTSLGSSLASDTGSMQ
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 13297.4 | 133 | 3.8 | -0.481 | 40.2 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR048214
Pfam:
SMART:
KEGG:
PRINTS: