Effector profile
| PlantPEAD ID: PlantPEAD33693 | Uniprot ID: A0A3M3LMR2 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 86840 | Pathogen type: Bacteria |
| Species: Pseudomonas cannabina | Strain: ICMP 2821 | Other name: |
| Gene name: | NCBI Gene ID: RBOW01000265 | |
| Entry name: A0A3M3LMR2_PSECA | Protein name: Type III effector HopH1 | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCAGCGCCTCCCTAACACATGTCGAGCATGAACGAGCTCATGAGCCAGGGTCGTGATTTTGTCGTCGTTATCCATTCCAAGGTGTAACGGTGAGCCATTCTGATTTAAGCGTATACTTCCTTTGTCTGGTGACCAGCCAATAATCGCATTGCTTCCTTCACCTTTGGTAAAGGTCCCCTTTCGTGATAGCTGTGATGCAATGTGCCGATTCTCGTTAAAGTTTTCTGGTTCGTACTTTTCCAG
Protein sequence:
MEKYEPENFNENRHIASQLSRKGTFTKGEGSNAIIGWSPDKGSIRLNQNGSPLHLGMDNDDKITTLAHELVHARHVLGRR
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 8993.03 | 80 | 8.19 | -0.909 | 34.79 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR028208
Pfam: PF14891
SMART:
KEGG:
PRINTS: