Effector profile
| PlantPEAD ID: PlantPEAD33723 | Uniprot ID: W4SBM1 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 56448 | Pathogen type: Bacteria |
| Species: Xanthomonas arboricola | Strain: pv. pruni MAFF 301420 | Other name: |
| Gene name: | NCBI Gene ID: BAVC01000026 | |
| Entry name: W4SBM1_9XANT | Protein name: Type III secretion system effector protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGAAAGTCTCCGCAACCCTTTCCCCGACAGCACACGCAGCACCGGATGGCATCGATCCGCCGGGCCCCAGCGCAATCTCCCAGCGTGGCGCCGCGCCCGCCGGCGGGCCGCTCGAGAGGCTGCCACGCCTGCGCCGCAGCAAGTCAGCTGCGGCATCCGCAGCGGCATTCCCGACAGACAGTGAACGCCTCGACGCGCTGTTCGGCAGCGCTCAGCCGGCACGCGGAAAGCTGCTCGAGACCGAGCAAGGGACCGTCCATCGAACGCCAATCCAGAAGCAGGAAATAGAGAATCTCGGCGACGGCCGCGCGCGGGTGAAGATCAATCCGACACGCCTGTTCGTCTCCACCGCCCCGGCGCTGGGCGCGGCAGATCGCAGTGATGCCTCCACGCTGGCTGCGCGATTCAACCTGCGCAGCGATCAGACCCAGCGCATGTTGAGCACGCCAACGTTCCATGCACATACCGAAAGAAACCCTGCAGGCACCTCGCAAGCCTCGCTCGCGCAGCGCCTACGGCTGGACGATCTCCGCGAGAAGAAAGTCGAATACAAATGGAACATCGCAAAGAACGGCAGCCTGGTGATCGGCGAGGTGCATCCGGGCGTGCCCCTGGATGAGCCGATGACAACCAAGCAGGCACGCAAAAAGAAGCAACCGTTCGCGCAAGGCCACGTCACCCTGATCGGGGGTCAGCCATGGCAGGAACCGTGGCAAGGCAATCGCCTGATCCCCGAAGCCCGCATCTGCGGCACGCTCTATTACGACGAACACGGCGAACTGTGCATCGATAACGATTCCGGCCGCTTCAGCGAGTATGCGGATCGCACGCCCGGGCATCTTGCGCGGGTCGCTGACATCTTCGCGCAGTATGGCCTGGCGGTGACACCGAAATGGTTGAAGAAAGAGCCCGTCGCACTGCGACATCAACCCGGCGCAATGCAGAAGGCGGCGCAAGCACAAGGCCAGTCCAGGGACGACGCCCAGGACGGTCGATTCGATACCTCACCTTTCGCAACCTGA
Protein sequence:
MKVSATLSPTAHAAPDGIDPPGPSAISQRGAAPAGGPLERLPRLRRSKSAAASAAAFPTDSERLDALFGSAQPARGKLLETEQGTVHRTPIQKQEIENLGDGRARVKINPTRLFVSTAPALGAADRSDASTLAARFNLRSDQTQRMLSTPTFHAHTERNPAGTSQASLAQRLRLDDLREKKVEYKWNIAKNGSLVIGEVHPGVPLDEPMTTKQARKKKQPFAQGHVTLIGGQPWQEPWQGNRLIPEARICGTLYYDEHGELCIDNDSGRFSEYADRTPGHLARVADIFAQYGLAVTPKWLKKEPVALRHQPGAMQKAAQAQGQSRDDAQDGRFDTSPFAT
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 36926.5 | 340 | 9.51 | -0.646 | 42.16 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: