Effector profile
| PlantPEAD ID: PlantPEAD33803 | Uniprot ID: A0A7T1KNL6 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 51029 | Pathogen type: Nematoda |
| Species: Heterodera glycines | Strain: | Other name: Soybean cyst nematode worm |
| Gene name: | NCBI Gene ID: MT012336 | |
| Entry name: A0A7T1KNL6_HETGL | Protein name: Effector protein 24A12 | |
| DOI: | ||
Gene/Protein information
Gene sequence:
GCACCGCATCCGTGCTGTCCCGGCAGTCAAAAAGTGGTTTCGCTGATGGCCAATTACGTTGGCACTTTCGCCCATTCCTTTTCAAAGGCATCGCTTTGTTCGGATGCCCAAAGTGTTGCGGGCGCATTGAAAGGCCAACTGATCGGCTGCTCGAAGGGCGGCGACGCAACTCTTTTGGCCGACATCGAAGGATTTCTTGGCACTCATTCTGCTGATGAGTGTGCCCACAGCCTCGGCTTCGTCCGTGCCATGTTCGTCATTGCCGCCTCCGCTTCTTCCCATGCCAGCAACAACAGCGAATGGCAGGCATTGAGTGCCCAGTTTGGTCAGCAAATCAGTGAAATTGACTCGAAATGTGCCGAGTTTGGCATTGGCATTGCCAAAGTGCCATATGACGGCCCCAAGGGTGATCACTCCCAACGAAATGTGCCTGGCACGGACAGTGTGATTTCGATGCCCGGATTGACCGGCTCACACACCCAATGA
Protein sequence:
APHPCCPGSQKVVSLMANYVGTFAHSFSKASLCSDAQSVAGALKGQLIGCSKGGDATLLADIEGFLGTHSADECAHSLGFVRAMFVIAASASSHASNNSEWQALSAQFGQQISEIDSKCAEFGIGIAKVPYDGPKGDHSQRNVPGTDSVISMPGLTGSHTQ
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 16498.4 | 161 | 5.92 | -0.033 | 28.47 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: