Effector profile
| PlantPEAD ID: PlantPEAD34277 | Uniprot ID: A0A0N0XD21 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. cilantro strain 0788_9 | Other name: |
| Gene name: | NCBI Gene ID: LGLN01000006 | |
| Entry name: A0A0N0XD21_PSESX | Protein name: HopBC1 | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TTAACGGACTTGGGGTATCCAGTCTCTGATAGCGGCAATCTTATCGTTGTGAACCTGCATACCTACCGATTCGCCACGAATAAGAAATGCCTCGACCCCCATAAGCGAGACGATATTATTCTTGAACGTGTTCAGTGCCTGCTGCCTCTCGTTGATGGAAGTGTTGGCTTTATCAAGAAAACCGCCGAGGTACATTTCAATATTACTCACGTACATTCCGGACACGCCATGCGGGGCCAGCCTGGCCAACTCTGTTGCGCTGTCACTGGCCATATCTGCCAGGACGATGCTGACGCCTCCGCGATGCAGGCGCTGCTTTAACGAGTCGAATGACAGATGCTCCTGATTGCGCTGTATCAATAGTTCAAGATGATCTGCATAGCCGGACTTATGCTGGCGTTTCAC
Protein sequence:
MKRQHKSGYADHLELLIQRNQEHLSFDSLKQRLHRGGVSIVLADMASDSATELARLAPHGVSGMYVSNIEMYLGGFLDKANTSINERQQALNTFKNNIVSLMGVEAFLIRGESVGMQVHNDKIAAIRDWIPQVR
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 15017.2 | 134 | 8.12 | -0.277 | 38.34 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: