Effector profile
| PlantPEAD ID: PlantPEAD34281 | Uniprot ID: F3FR11 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. japonica str. M301072 | Other name: |
| Gene name: | NCBI Gene ID: AEAH01001278 | |
| Entry name: F3FR11_PSESX | Protein name: HopBC1 | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TTGCATGATAATTTAAATGTAAGGGCCAACACCACAAAGGTCACTGATTATGTGGGTACCAAGGCCGCCAATCAGATTCCTTGCCTTCTAAGCAACGCGACGTTCCAGGGCGACGTTATATCCGTAGCAAACTCAATGGCGGTCCTTGCTGCGATGGGGCAAGGGCACGGTAATGTTATTGTCGCCGACCTGGATAAGGCACACCTTGCCGGCGTGCAATCAGTCCTCGCAATTGCTCAATCATCTGGCAGTCAAGAGGCGTGGTTGAGAGAGGTGAAACGCCAGCATAAGTCCGGCTATGCAGATCATCTTGAACTATTGATACAACGCAATCAGGAGCATCTGTCATTCGACTCGTTAAAGCAGCGCCTGCATCGCGGAGGCGTCAGCCTCGTCCGGGCAGATATGGCCCGAGACAGCGCAACAGAGTTGGCCGGGCTGGCCCCGCATGGCGTATCCGGAATGTACGTGAGTAATATTGAAATGTACCTCGGCGGTTTTTTTGATAAAGCCAACACTTCCATCAATGAGAGGCAGCAGGCACTGAACACGTTCAAGAATAATATCGTCTCGCTTATGGGGGCCGAGGCATTTCTTATTCGTGGCGAATCGGTAGGTATGCAGGTTCACAATAAGAATGCCGCTATCAACGACTGGATACCCCAAGTCCGTTAA
Protein sequence:
MHDNLNVRANTTKVTDYVGTKAANQIPCLLSNATFQGDVISVANSMAVLAAMGQGHGNVIVADLDKAHLAGVQSVLAIAQSSGSQEAWLREVKRQHKSGYADHLELLIQRNQEHLSFDSLKQRLHRGGVSLVRADMARDSATELAGLAPHGVSGMYVSNIEMYLGGFFDKANTSINERQQALNTFKNNIVSLMGAEAFLIRGESVGMQVHNKNAAINDWIPQVR
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 24306.5 | 224 | 7.14 | -0.177 | 36.57 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: