Effector profile
PlantPEAD ID: PlantPEAD34291 Uniprot ID: A0A3M5S6M5 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: pv. lachrymans strainICMP 826 Other name: Pseudomonas amygdali pv. lachrymans
Gene name: NCBI Gene ID: RBQI01000382
Entry name: A0A3M5S6M5_PSEAV Protein name: Type III helper protein HrpW1
DOI:
Gene/Protein information
Gene sequence:
ATGAGCATCGGTATCACCCCCACACCCTACCAACCCACGTCAGCCGCGCTGGACTTCTCGGCGCTGAGTGAAAAAAGCCCGCAGACAAACACCATCCACGATGAGAACGCCCCACAGGCCGTAGACGCTGGTGCCATGCTGTTCAACAGCGCCGCACCGAAAAACGTCAGTTTCGGGCAACCTGACAACAGCGTGCAGAGCCCGCAGGATGCCAACAACACAGCAAACCCCGAGTCCAACCTCATCAAGCTGTTCAGTGCATTGATTGTTTCACTGCTGCAGATGCTCATGAACCTTAATAAAAAACAGGACACAGATCAGGATCTCGAGCGAGTGGCAGGACCCTTTTCAGAACAATGGCGGGCTCGGTACGCCTTCAACCGATAG
Protein sequence:
MSIGITPTPYQPTSAALDFSALSEKSPQTNTIHDENAPQAVDAGAMLFNSAAPKNVSFGQPDNSVQSPQDANNTANPESNLIKLFSALIVSLLQMLMNLNKKQDTDQDLERVAGPFSEQWRARYAFNR
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
13969.5 128 4.75 -0.491 46.48
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.