Effector profile
PlantPEAD ID: PlantPEAD34315 Uniprot ID: A0A0P9YBM6 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 29438 Pathogen type: Bacteria
Species: Pseudomonas savastanoi Strain: pv. retacarpa strain ICMP16945 Other name:
Gene name: NCBI Gene ID: LJRD01000184
Entry name: A0A0P9YBM6_PSESS Protein name: Type III effector hopAK1
DOI:
Gene/Protein information
Gene sequence:
TCAGCTCACGGTTTTGGCGCCGGCATTGGCCAAGTCATAGGCTCTGGCGGCTTCGGCGGTCTTGATGTCGCGCTGATAGCTGGGCGTCCAGGCGGTCACCGGTGACTTCTGGGTGAAGCTGACATTGCTGCCGATGTCCTTGAAGTGCGCATCGCCATAGTCATCCAGCGCGCCGGAGTTGCTGGCCTTGTTGGAAACATCCACGCCTTTTGCGAAATAGTTGGCCTGCGAGAGGATGGTCGCATCCCCCGTCGCGGTGAAGCCAAGATGGAAGTTGTCGATCGAGTTGTTGTAAACGTCAAAGTCGCCATGCCGCATCAGGCCGGGTGCCCGAACATCCAGGTTGCTGAACACATTGTTGGCGATGGTCATGCGCGGGTAACCCTTGTACTCGGCCTTGGCTTGAGCGGAGTCGTCCGGCTGACCGAGAATCGCGCCATATTCGTTGTTCTGGAGTTTCGAGTTGGTCAGACTGACGTTGTCTGCCGTCCCGCCGACATAAAGCAGTTTGTCCAGGCCTTTGGCGTTCTGATCCTTGGTGCCTGAATAGGTGTTGTGATCGATCCAGTATTTCTGACCGCTGCTGATGAACATCTGCATGTCACCGTTTTCGCGATAACGGCTGTCGTGGTCGAAGTTCAGATTCTGGAAGATGTCATTGCTGGCGGTCTTGCCGCTGGCCAGGTAGATGTTGTGCAGGCTGTTGCCCTTGTCGGTACCCAGCAGGGTCTTGTTGGCGCCAAAGTTGATGGTCACCTTGCTGTCGGCAGACAGGTTGGCCCCCAGTTTGACGGTACGGGCTTTGTCGTCCTCCATGTACTTCTTGAGGTCCGCTACGGTATTGACCGTGACGACTTCGCCACCATTACCGCCGGTGGTGTTCGCCTGTTTGGCGAAGCCGACCATTCCGGACATGTCGGCCCCAGGACCGTTGCCCGCTCGGTGCGCGGGTTGCGCCACTTTTTCTGTGGTCTCAGATCTGTCTGTGGCGGTTGGCAACGTTTTGGCGGGCGCAGACTGATTGGCGGCTGGCGTATTGCCTTGGGCTGACGCCGAAGTGCGCGCCGTATCAGACGGCGCTGCTGTGGCGCTCTTTTGCAGCGAGACCGGTTTGTCGGTCGGATAATCGTTTTTCACCACGAACGGCTTTTCTGTGTTGCCGGACGATGACGGCGACCCTGAAGAGGGGGCTGATGAAGACTGAAGGGAGGTCGGCGCCTGTTCCCGTTCAGACGGCGCAGGTGCCGGTGTCGAGCCGTCCTGCTGATGCCCTTGTGATCTGGAAAACAGATCCTTGAGGATGGTGCGAATGGCTTCCACCAGCTTGTTCAGCAACAACTCGACGGGGTTTTCAGTTGCACCCGAGGCTGCGTTTGTAGCGGGCGTTTGCGCCCTGGAGCCAAGGCCATTGAACGACGACTGCAACCTTGTTGCCTGCTGCGGCGGTGCGAAGTCGACCAGCTTGCTGCCATTGCCGGACGTGACCTGAGGTGGCGGACTGTTATCGGCTTGCGGGTTTATGCCCTGGGTTGGCTGCCCGGAGACGGGATAATAATTTCGGGTGATCATATTCATGGGTGATTGCCCTGCCTGCAGGAATGAACGATTCGTGATCCGGAT
Protein sequence:
MRITNRSFLQAGQSPMNMITRNYYPVSGQPTQGINPQADNSPPPQVTSGNGSKLVDFAPPQQATRLQSSFNGLGSRAQTPATNAASGATENPVELLLNKLVEAIRTILKDLFSRSQGHQQDGSTPAPAPSEREQAPTSLQSSSAPSSGSPSSSGNTEKPFVVKNDYPTDKPVSLQKSATAAPSDTARTSASAQGNTPAANQSAPAKTLPTATDRSETTEKVAQPAHRAGNGPGADMSGMVGFAKQANTTGGNGGEVVTVNTVADLKKYMEDDKARTVKLGANLSADSKVTINFGANKTLLGTDKGNSLHNIYLASGKTASNDIFQNLNFDHDSRYRENGDMQMFISSGQKYWIDHNTYSGTKDQNAKGLDKLLYVGGTADNVSLTNSKLQNNEYGAILGQPDDSAQAKAEYKGYPRMTIANNVFSNLDVRAPGLMRHGDFDVYNNSIDNFHLGFTATGDATILSQANYFAKGVDVSNKASNSGALDDYGDAHFKDIGSNVSFTQKSPVTAWTPSYQRDIKTAEAARAYDLANAGAKTVS
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
57105.7 539 7.1 -0.648 34.86
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.