Effector profile
PlantPEAD ID: PlantPEAD34340 Uniprot ID: A0A193SKN4 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 1583341 Pathogen type: Bacteria
Species: Pseudomonas cerasi Strain: Sour cherry Other name:
Gene name: NCBI Gene ID: LT222319
Entry name: A0A193SKN4_9PSED Protein name: Type III effector HopJ1
DOI:
Gene/Protein information
Gene sequence:
TCAAGCCTTGCGCTTGAGCGGCTCGCCTTCAAACTTTACACCCGCCAGACCATTCGCGATCAGCGCACGGATATTGCCGTGGTCGCTGCCTTCAGGTGTGGCTTGTACCGAGCGGTAATGCTCGCCGAACGCCAGCAGTGCCTCCTCGTCAGTCAAGCCTTCCAGTAGCGCCAGGCCCAGCGTCTTGCACGACCCTTCGTTTTGCCCGGCAGCATTGTCGACGTCGCCGTTTCTGAAGGCCTGAGGCTGGTAGTCGTAGCCTTCGGCGATGAACGCCAGGGTGTCGGCAAACGCATGCTCGCCGCTGCGCAGGCGGGTGCGCAGGGAATTCAGATCAGTCAT
Protein sequence:
MTDLNSLRTRLRSGEHAFADTLAFIAEGYDYQPQAFRNGDVDNAAGQNEGSCKTLGLALLEGLTDEEALLAFGEHYRSVQATPEGSDHGNIRALIANGLAGVKFEGEPLKRKA
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
12151.5 113 4.94 -0.43 32.78
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.