Effector profile
| PlantPEAD ID: PlantPEAD34342 | Uniprot ID: A0A1M7LE90 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 1190415 | Pathogen type: Bacteria |
| Species: Pseudomonas asturiensis | Strain: LMG 26898 | Other name: |
| Gene name: | NCBI Gene ID: FRDA01000003 | |
| Entry name: A0A1M7LE90_9PSED | Protein name: HopJ type III effector protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCAGCCTTTACGCTTCAGCGGTTCAGCTTCGAACTTCACGCCTGCCAGGCCGTGCTTGATCAGGGCGCGAATGTTGCCGTGGTCGCTGCCCTCTGGTGTAGCGAGTACCGATCGGTAATGTTCGCCGAACGCGAGTAACGCTTCTTCGTCGCTCAGGCCTTCCAGCAGGGCCATGCCCAGGGTTTTGCACGAGCCTTCGTTCTGGCCCGCTGCGTTGTCGACGTCGCCATTACGGAACGCTTGTGGCTGGTAGTCATAGGTATCGGCGATGAACGCCAGGGTGTCGGCAAAGGCGTGCTCGCCGCTGCGCAGGTGTGTGCGCAGGGTGTTCAGTTCAGTCAT
Protein sequence:
MTELNTLRTHLRSGEHAFADTLAFIADTYDYQPQAFRNGDVDNAAGQNEGSCKTLGMALLEGLSDEEALLAFGEHYRSVLATPEGSDHGNIRALIKHGLAGVKFEAEPLKRKG
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 12259.7 | 113 | 5.25 | -0.421 | 33.07 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR014984,IPR038604
Pfam: PF08888
SMART:
KEGG:
PRINTS: