Effector profile
| PlantPEAD ID: PlantPEAD34343 | Uniprot ID: A0A1X0MDM2 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 1958950 | Pathogen type: Bacteria |
| Species: Pseudomonas floridensis | Strain: GEV388 | Other name: |
| Gene name: | NCBI Gene ID: MUIO01000285 | |
| Entry name: A0A1X0MDM2_9PSED | Protein name: HopJ type III effector protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TTAGCCCTTGCGCTTGAGCGGCTCGGCTTCAAACTTCACGCCTGCCAGGCCGTGAGCGATCAGTGCGCGGATGTTGCCGTGGTCGCTGCCATCGGGTGTGGCCTGGACAGAGCGGTAATGCTCGCCGAACGCCAGCAGCGCCTCTTCATCGCTCAAGCCTTCCAGCAGCGCCATGCCCAGTGTCTTGCACGAGCCTTCGTTCTGACCCGCAGCGTTTTCCACGCCACCGTTCTTGAAGGCCTGGGGCTGATAGTCGTAAGTGTCGGCAATGTAGGTCAGAGTGTCGGCAAATACATGCTCGCCGCTGCGCACACTTGCGCGCAGGGAGTTCAGGTCAGTCAT
Protein sequence:
MTDLNSLRASVRSGEHVFADTLTYIADTYDYQPQAFKNGGVENAAGQNEGSCKTLGMALLEGLSDEEALLAFGEHYRSVQATPDGSDHGNIRALIAHGLAGVKFEAEPLKRKG
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 12083.4 | 113 | 5.06 | -0.394 | 28.21 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR014984,IPR038604
Pfam: PF08888
SMART:
KEGG:
PRINTS: