Effector profile
| PlantPEAD ID: PlantPEAD34359 | Uniprot ID: A0A3M5TZG5 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 46257 | Pathogen type: Bacteria |
| Species: Pseudomonas avellanae | Strain: ICMP 9749 | Other name: |
| Gene name: | NCBI Gene ID: RBTX01000149 | |
| Entry name: A0A3M5TZG5_9PSED | Protein name: HopJ1 protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCAAGCCTTGCGCTTGAGCGGCTCGCCTTCAAACTTCACACCTGCAAGGCCCTGCTCGATCAGCGCACGGATGTTGCCGTGATCGCTGCCTTCGGGCGTGGCCGCTACGGCGCGGTAATGTTCGCCAAAGGCGAGCAGCGCCTCTTCATCACTCAAACCTTCCAGCAACGCCAGGCCAAGTGTCTTGCACGAGCCTTCGTTCTGCCCGGCAGCATTGTCGACGTCGCCGTTTCTAAACGGCTGAGGCTGATATTCGTAACATTCTGCAATAAAAGCCAGGGTGTCGGCGAAGGCATGTTCGCCGCTGCGCAGGCGGGTACGCAGTGCATTGATATCAGTCAT
Protein sequence:
MTDINALRTRLRSGEHAFADTLAFIAECYEYQPQPFRNGDVDNAAGQNEGSCKTLGLALLEGLSDEEALLAFGEHYRAVAATPEGSDHGNIRALIEQGLAGVKFEGEPLKRKA
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 12206.6 | 113 | 4.86 | -0.383 | 41.1 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR014984,IPR038604
Pfam: PF08888
SMART:
KEGG:
PRINTS: