Effector profile
PlantPEAD ID: PlantPEAD34361 Uniprot ID: A0A3M5WC24 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: pv. apii strain ICMP 11947 Other name:
Gene name: NCBI Gene ID: RBUG01000142
Entry name: A0A3M5WC24_9PSED Protein name: Type III effector HopJ1
DOI:
Gene/Protein information
Gene sequence:
TCAAGCCTTGCGCTTGAGCGGCTCGCCTGCAAACTTCACACCCGCCAGACCATTCGCCATCAGCGCACGGATATTGCCGTGGTCGCTGCCTTCAGGTGTGGCTTGCACCGAGCGGTAATGCTCGCCGAACGCCAGCAGTGCCTCTTCGTCAGTCAAGCCTTCCAGCAATGCCAGGCCCAGGGTCTTGCACGACCCTTCGTTTTGCCCGGCAGCATTGTCGACGTCGCCGTTTCTGAAGGCCTGAGGCTGATAGTCATAGCCGTCGGCGATGAATGCCAGGGTGTCGGCAAACGCATGCTCGCCGCTGCTCAGGCTGGTGCGCAGGGAATTCAGATCAGTCAT
Protein sequence:
MTDLNSLRTSLSSGEHAFADTLAFIADGYDYQPQAFRNGDVDNAAGQNEGSCKTLGLALLEGLTDEEALLAFGEHYRSVQATPEGSDHGNIRALMANGLAGVKFAGEPLKRKA
Protein structure:
AlphaFold
download
Loading ...
Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
11959.2 113 4.73 -0.341 29.23
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.