Effector profile
| PlantPEAD ID: PlantPEAD34366 | Uniprot ID: A0A6B2APR9 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: P123 | Other name: |
| Gene name: | NCBI Gene ID: VLIF01000001 | |
| Entry name: A0A6B2APR9_PSESX | Protein name: HopJ type III effector protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCAAGCCTTGCGCTTGAGCGGCTCGCCTTCAAACTTGACACCTGCCAGACCCTTCGCGATCAGCGCACGGATATTGCCGTGATCGCTGCCTTCAGGCGTGGCTTGCACCGAGCGGTAATGCTCGCCGAACGCCAGCAGTGCCTCTTCGTCAGTCAGGCCCTCCAGTAATGCCAGGCCCAGGGTCTTGCACGAGCCTTCGTTTTGCCCGGCAGCATTGTCGACGTCGCCGTTTCTGAAGGCCTGAGGCTGGTAGTCGTAGCCTTCGGCGATGAACGCCAGGGTGTCGGCAAACGCATGCTCGCCGCTGCGCAGGCGGGCGCGCAGGGAATTCAGATCAGTCAT
Protein sequence:
MTDLNSLRARLRSGEHAFADTLAFIAEGYDYQPQAFRNGDVDNAAGQNEGSCKTLGLALLEGLTDEEALLAFGEHYRSVQATPEGSDHGNIRALIAKGLAGVKFEGEPLKRKA
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 12135.5 | 113 | 5.11 | -0.412 | 33.36 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR014984,IPR038604
Pfam: PF08888
SMART:
KEGG:
PRINTS: