Effector profile
PlantPEAD ID: PlantPEAD34390 Uniprot ID: A0A3M4DYJ5 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 29438 Pathogen type: Bacteria
Species: Pseudomonas savastanoi Strain: pv. retacarpa strain ICMP 16946 Other name:
Gene name: NCBI Gene ID: RBNM01000391
Entry name: A0A3M4DYJ5_PSESS Protein name: Effector protein hopAB1
DOI:
Gene/Protein information
Gene sequence:
ATGCCGGGTATCAACGGAGCAGGACCATCAAATTTTTTTTGGCAGTGGCGCACAGACGGCGAGCCAGTAACTGAGCGCGAACATGACTCCAGTCGCAGTGCCAGCTCGGCGAACAGTCCGGAGTTGCCGCCGCCCGCATCTCCTGCGGAATCCGGACGCCAGAGGTTGCTACGATCCAGCGCGTTGTCGCGGCAAACCAGAGAATGGCTGGAGGCAACGCCTGCCCGTGTCCAAGGCGCCAATCCGCCCGCAGAAGCCAGGCAGTCGCCTGAGGCACAACAGGCAGAGCGCATCGTTCAGGAGTTGGTCAGGGGAGGCGCTGATCTTAATAATGTTCGCACCATGCTCAGAAATGTAATGGATAACAACGCCGTAGCTTTTTCTCGAGTCGAACGGGATATCTTGCTTCAACATTTTCCTAACATGCCTATGACTGGAATCAGCAGCGACTCGGTGCTCGCTAACGAGCTCCGGCAGAGGCTTCGTCAAACGGTCCGCCAACAAAGAGCTTTGGTACAATCGTCAACGCCTGCCCGCCTCGCAGACTCATCATCAGGAAGCAGCCAGCGTTCGTTAATTGGGCGGTCCACTATGTTGATGACACCGGGCCGAAGCTCGTCTTCGAGCGCGGCGGCTTCTAGAACATCGGTCGACAGGCATCCTCAAGGCCTGGACCTGGAATCAGCACGCCTCGCCAGTGCTGCGAGGCATAATCATAGTGCCAACCAGACTAACGAAGCACTGCGCAGATTGACTCAAGAGGGAGTGGACATGGAGCGCCTGCGCACCTCTCTTGGTCGCTATATAATGTCGCTTGAACCGCTACCCCCAGATTTGAGGCGCGCGTTAGAAAGTGTAGGCATTAATCCCTTTATACCAGAGGAGTTGAGCTTGGTGGATCACCCCGTGTTGAACTTCAGTGCTGCGCTGAACCGCATGCTCGCTTCGCGTCAGACCACTACGAACAGTCCGGAATTGCCGCCGCTCGCATCTTCTGCGGAATCCGGACGCCGGAGGCTGCTACGTTCCCCACCGTTGTTGTCTGGCCAAAGAGAATGGATTGGGCAAGGAGCAGAGCCTCAATCCTCACGCCTCAATAGGGCTGTAAGATTGGCGGTGATGCCACCGCAGAAGGAAAATGAAGATAATGTGGCTTACGCAATACGCTTGCGTAGACTGAACCCGGGTGCGGATGTAAGTAGGGTAGTTGCATCCTTTATAACTGACCCGGCGGCTCGACAGCAAGTTGTGGATGATATCCGCGCAGCCTTGGATATAGCTCCACAATTTAGTCAATTGCGTACAATCTCGAAGGCAGATGCTGAATCTGAAGAGTTGGGTTTCAGAGATGCGGCAGATCACCCCGACAACGCGACGTCCTGCCTTTTTGGTGAAGAGTTGTCACTGAGTAATCCGGATCAGCAGGTAATCGGTCTAGCGGTTAATCCGACGGATAAGCCGCAGCCTTACAGCCAAGAGGTAAACAAGGCTCTTACATTCATGGATATGAAAAAACTTGCCCAATACCTGGCAGACAAGCCCGAGCATCCGCTGAACAGACAAAGGCTTGATGCCAAAAATATCTCTAAGTACGCTTTTAAAATTGTTCCATGA
Protein sequence:
MPGINGAGPSNFFWQWRTDGEPVTEREHDSSRSASSANSPELPPPASPAESGRQRLLRSSALSRQTREWLEATPARVQGANPPAEARQSPEAQQAERIVQELVRGGADLNNVRTMLRNVMDNNAVAFSRVERDILLQHFPNMPMTGISSDSVLANELRQRLRQTVRQQRALVQSSTPARLADSSSGSSQRSLIGRSTMLMTPGRSSSSSAAASRTSVDRHPQGLDLESARLASAARHNHSANQTNEALRRLTQEGVDMERLRTSLGRYIMSLEPLPPDLRRALESVGINPFIPEELSLVDHPVLNFSAALNRMLASRQTTTNSPELPPLASSAESGRRRLLRSPPLLSGQREWIGQGAEPQSSRLNRAVRLAVMPPQKENEDNVAYAIRLRRLNPGADVSRVVASFITDPAARQQVVDDIRAALDIAPQFSQLRTISKADAESEELGFRDAADHPDNATSCLFGEELSLSNPDQQVIGLAVNPTDKPQPYSQEVNKALTFMDMKKLAQYLADKPEHPLNRQRLDAKNISKYAFKIVP
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
59142.3 537 9.42 -0.606 62.47
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.