Effector profile
PlantPEAD ID: PlantPEAD34397 Uniprot ID: I1V8A5 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: pv. tomato strain CFBP1324 Other name:
Gene name: HopAB3 NCBI Gene ID: JQ480304
Entry name: I1V8A5_PSEUB Protein name: AvrPtoB type III effector
DOI:
Gene/Protein information
Gene sequence:
GACCCCGAGCCAGCATCGGGGGGCGCACACGGATCCAGCAGTGGCGCGAGATCCTCGAACAGTCCGCGCTTGCCGGCGCCTCCGGATGCACCCGCGTCGCAGGCGCGAGATCGACGCGAAATGCTTTTGCGAGCCAGGCCGCTGTCGCGCCAAACCAGGGAGTGGGTGGCGCAGGGTATGCCGCCAACGGCGGAGGCTGGAGTGCCCATCAGGCCGCAGGAGTCTGCCGAGGCTGCAGCGCCGCAGGCACGTGCAGAGGAAAGACACACGCCGGAGGCTGATGCAGCAGCGTCGCATGTACGCACAGAGGGAGGACGCACACCGCAGGCGCTTGCCGGTACCTCCCCACGCCACACAGGTGCGGTGCCACACGCCAATAGAATTGTTCAACAATTGGTTGACGCGGGCGCTGATCTTGCCGGTATTAACACCATGATTGACAATGCCATGCGTCGCCACGCGATAGCTCTTCCTTCTCGAACAGTACAGAGTATTTTGATCGAGCATTTCCCTCACCTGCTAGCGGGTGAACTCATTAGTGGCTCAGAGCTCGCTACCGCGTTCCGTGCGGCTCTCCGTCGGGAGGTTCGCCAACAGGAGGCGTCAGCCCCCCCAAGAACAGCAGCGCGGTCCTCCGTAAGGACGCCGGAGCGGTCGACGGTGCCGCCCACTTCTACGGAATCATCATCGGGCAGCAACCAGCGTACGTTATTAGGGCGGTTCGCCGGGTTGATGACGCCTAATCAGAGACGTCCGTCGAGCGCTTCGAAAGCGTCTGCCTCTCAAAGGCCTGTAGACAGAAGCCCGCCACGCGTAAACCAGGTACCCACAGGCGCTAACAGGGTTGTGATGCGTAATCATGGTAATAACGAGGCCGACGCCGCGCTGCAAGGATTGGCTCAGCAGGGGGTTGATATGGAGGACCTGCGCGCCGCGCTTGAAAGACATATATTGCATCGCCGCCCGATCCCCATGGATATAGCGTACGCCTTGCAGGGTGTGGGCATTGCGCCAAGTATCGATACGGGAGAGAGCCTTATGGAAAACCCGCTGATGAATTTGAGTGTTGCGCTGCACCGCGCACTAGGGCCTCGTCCCGCTCGTGCTCAAGCGCCTCGTCCAGCCGTTCCGGTGGCTCCCGCGACCGTCTCCAGGCGACCAGATAGCGCGCGTGCCACAAGATTGCAGGTAATACCGGCGCGGGAGGATTACGAAAATAATGTGGCCTACGGAGTGCGCTTGCTGAGCCTGAATCCGGGCGCGGGGGTCAGGGAGACTGTTGCGGCCTTTGTAAACAACCGTTACGAGCGGCAGGCGGTTGTTGCCGACATACGCGCAGCCCTAAATTTATCTAAACAATTCAATAAGTTGCGTACGGTCTCTAAGGCCGATGCTGCCTCCAATAAACCGGGCTTCAAGGATGCGGCGGACCACCCAGACGACGCGACGCAATGCCTTTTTGGTGAAGAATTGTCGCTGACCAGTTCGGATCAGCAGGTGATCGGCCTGGCAGGTAAGGCAACGGACATGTCGGAGTCTTACAGCCGAGAGGCAAATAAGGACCTGGTGTTCATGGATATGAAAAAACTTGCCCAATCCTCGCAGGCAAGC
Protein sequence:
DPEPASGGAHGSSSGARSSNSPRLPAPPDAPASQARDRREMLLRARPLSRQTREWVAQGMPPTAEAGVPIRPQESAEAAAPQARAEERHTPEADAAASHVRTEGGRTPQALAGTSPRHTGAVPHANRIVQQLVDAGADLAGINTMIDNAMRRHAIALPSRTVQSILIEHFPHLLAGELISGSELATAFRAALRREVRQQEASAPPRTAARSSVRTPERSTVPPTSTESSSGSNQRTLLGRFAGLMTPNQRRPSSASKASASQRPVDRSPPRVNQVPTGANRVVMRNHGNNEADAALQGLAQQGVDMEDLRAALERHILHRRPIPMDIAYALQGVGIAPSIDTGESLMENPLMNLSVALHRALGPRPARAQAPRPAVPVAPATVSRRPDSARATRLQVIPAREDYENNVAYGVRLLSLNPGAGVRETVAAFVNNRYERQAVVADIRAALNLSKQFNKLRTVSKADAASNKPGFKDAADHPDDATQCLFGEELSLTSSDQQVIGLAGKATDMSESYSREANKDLVFMDMKKLAQSSQAS
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
57350.3 537 10.1 -0.534 54.92
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.