Effector profile
PlantPEAD ID: PlantPEAD34400 Uniprot ID: S6T863 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: pv. actinidiae ICMP 18807 Other name:
Gene name: NCBI Gene ID: AOKG01002252
Entry name: S6T863_PSESF Protein name: Type III effector HopAB2
DOI:
Gene/Protein information
Gene sequence:
AAGACGCACGCTGGACACGCCTGCTTATGCCCGGGCACCGCAGCACGCAGGAGCGACGGCACACGCCAACAGCATCGTTCAACAATTGGTCGAAGCGGGCGCTGATCTTGCCCATACTCGCACCATGTTCCGCAATATTCTGAGAGGCGAAGAGATTGCTCTTTCTCTAGCCGAACAAAGTGTTTTGCTCCAGCATTTCCCAAACATGCTAGCGACTGGAATCAACCGCCACTCAGAGCTCGCTATCGAGCTTCGTGGGGCGCTCCGTAGAGCGGATAGCCAACAGGCGGTGCCAGCACCCGCAAGGACACCACCACGGTCCTCTGCAAGGACGCCGGAGCGGTCTCTGGCACCGCCCACCGCTACGGAATCATCATCGGGCAGCAACCAGCGTACGTTATTAGGGCGGTTCGCCGGGTTGATGACGCCTAATCAGAGACGTCCGTCGAACGTTTCGAACGCGTCTACCTCTCAAAGGCCTGTAGACAGAAGCCCGCCACGCGTAAACCAGGTACCCACAGGCGCTAACAGGGTTGCGATGCGTAATCGTGGTAATAACCAGGCCGACGCCGCGCTGCAAGGATTGGCTCAGCAGGGGGTTGATATGGAGGACCTGCGCGCCGCGCTTGAAAGACATATATTGCATCGCCGCCCGATCCCCATGGATATAGCGTACGTCTTGCAGGGTGTGGGCATTGCGCCAAGTATCGATACGGGAGAGAGCCTTATGGAAAACCCGCTGATGAATTTGAGTGTTGCGCTGCACCGCGCACTAGGGTCTCGTCCCGCTCGTGCTCAAGCGCCTCGTCCAGCCGTTCCGGTGGCTCCCGCGACCGTCTCCAGGCGACCAGATGGCGCGCGTGCCACAAGATTGCAGGTAATACCGGAGCGGGAGGATTACGAAAATAATGTGGCCTACGGAGTGCGCTTGCTGAGCCTGAATCCGGGCGCGGGGGTCAGGGAGACTGTTGCGGCCTTTGTAAACAACCGTTACGAGCAGCAGGCGGTTGTTGCCGACATCCGAGCAGCCCTGAGTTTATCTAAAGAATTCAATAAGTTGCGTACGGTCTCTAAGGCCGATGCTGCCTCCAATAAACCAGGCTTCAAGGATGCGGCGGACCACCCAGACGACGCGACGCAATGCCTTTTTGGTGAAGAATTGTCGCTGACCAATTCGGATCAGCAGGTGATCGGCCTGGCAGGTAAGGCAACGGACATGTCGGAGTCTTACAGCCGAGAGGAAAATAAGGACCTGGTATTCATGGATATGAAAAAACTTGCCCAATTCCTCGCAAGCAAGCCTGAGCATCCGATGACCAGAGAAACGCTTAACGCCGAAAATATCGCCAAGTATGCTTTTAGAATAGTCCCCTGA
Protein sequence:
RRTLDTPAYARAPQHAGATAHANSIVQQLVEAGADLAHTRTMFRNILRGEEIALSLAEQSVLLQHFPNMLATGINRHSELAIELRGALRRADSQQAVPAPARTPPRSSARTPERSLAPPTATESSSGSNQRTLLGRFAGLMTPNQRRPSNVSNASTSQRPVDRSPPRVNQVPTGANRVAMRNRGNNQADAALQGLAQQGVDMEDLRAALERHILHRRPIPMDIAYVLQGVGIAPSIDTGESLMENPLMNLSVALHRALGSRPARAQAPRPAVPVAPATVSRRPDGARATRLQVIPEREDYENNVAYGVRLLSLNPGAGVRETVAAFVNNRYEQQAVVADIRAALSLSKEFNKLRTVSKADAASNKPGFKDAADHPDDATQCLFGEELSLTNSDQQVIGLAGKATDMSESYSREENKDLVFMDMKKLAQFLASKPEHPMTRETLNAENIAKYAFRIVP
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
49655.1 457 9.79 -0.474 49.88
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.