Effector profile
PlantPEAD ID: PlantPEAD34412 Uniprot ID: A0A3M4DH41 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: pv. lachrymans strainICMP 826 Other name: Pseudomonas amygdali pv. lachrymans
Gene name: NCBI Gene ID: RBQI01000218
Entry name: A0A3M4DH41_PSEAV Protein name: Type III effector HopAB2
DOI:
Gene/Protein information
Gene sequence:
TCAGGGCACGATTCTAAACGCGTAGTTAGCGATGGTTCTGGCGTCAAGCGGTTGTCTGTTCATCGGATGCTCAGGCTTGCCTGCGAGGAATTGGGCAAGTTTTTTCATATCCATGAACACCAGGTCCTTATTTCCCTGCTGACTGTAAAGCTCCGACGTGTCCGTCGGATTCCCCGCCAGGCCGATCACCTGCTGACGAGAATTTTCCAGCGACAATGGTTCACCAAAAAGGCAATGGGTCGCATCGTCCGGGTGATGGTGTTCCGCGTCCCTGAAGGGCGGATTTTGGGATTCAACAACGGCCTTGGAGACCGTACGCAGTTGATTGAATTGTGAGGTTATAGGGTCCCGGGCTGCGCGGATATCGTCCACAACTGCCGGCCGGTCCGCCGGATCGGTTATAAAGGCTGCAACAACCCTCCTTACTCCAACCCCCGGGTTCAGGTTAAGCAAGCGCATTCCGTAAGCCACATTATTTTCATAATCCTCCCGCTCCGGAATTACCCGCAATGCGCTGGAACGCGCGCCATCTGGTCGCCTGGAGGCAGCTGGAGGATGCACCGGAACGGCAGGGCGAGGCGGAGCACTAACGGGACGTGGCCCAAGCACGCGGTGCAGCGCAACACTCAAATCCATCAGCGGGCTTTCCACAAGGCTCTCAGCCGTGTCAACACTTGGGGGAATGCCCACGCTCTGCAACGCGTACGCTATATCCAAGGGGATCGGTTGGTGCCGCAATAGATGTCTTTCAAGCGCCGTGCGCAGGTCTTCCAGATTGACCCCTTGTTGAACCAATCCCTGCAAGGCTGCGGCGGCCTGGTTATTGCCACGATTACGCATCGCAGCCCTGTCGGGGCGTATGGGTACCTGATTGACGCGTGGCGGGCTTCTGTCTACCGGTGTCTGAGAGGTCGATGCGTTTGACGAACGTCTCTGATCAGGCGTCATCAGCCGGGCGAACCGCCCAAATAATGAACGCTGGCTGCTACTCGATGATGATTGCGTAGGGGTACGGGCCGCCGGGGGCCGCGTCGGTGTCCTTGCTGGAGTTGACGCCGCCTGTTGGCGATCCGCTCTACGGAGCGCATGACGGAGCTCGATAGCGAGCTCTGAATGGGGGTTGATTCCAGTCGCAATCATGTTAGGGAAATGCTCGCGCAAAATACTCTGTTCGGCTCTAGAAAGAGCCATCTCTTCGCCTCTCATGATATTGCGCAGCGTGGTACGAGTATGGGCAAGATCAGCGCCCGCGCTGACCAATTGCTGAACGATGCTATTGGCGTGTGCCGTCACCCCTGCGTGCTGCGGCCTGGGTCTTGTCTCGGCAGGTGCATGCGGTGCTGCGGCATCGGCAGACCCATGCGGTCTGCTACGCACTTCAGCCTCCGCCGTTGGCGGCATGCCCTGCTCCAGCCACTCCCTGGTTTCGCGCGACAGCGGTCTGGACCGCAAAAGCCTCTCACGCCGATCTCGCGCCTGCGAAGCGGAAGTCTCTGAAGGGGGCGGCGGCACCTGCAGACTGTTCGAAGAGCTGGCGCCGCTGCTGGATTCGCGTGCGCGCCCTGATGCAGGCTCGTGGTCTGTGTGCCCGGCAATATAAGCGCCCGATGGCCCCGCTCTATTGATACCCACCAT
Protein sequence:
MVGINRAGPSGAYIAGHTDHEPASGRARESSSGASSSNSLQVPPPPSETSASQARDRRERLLRSRPLSRETREWLEQGMPPTAEAEVRSRPHGSADAAAPHAPAETRPRPQHAGVTAHANSIVQQLVSAGADLAHTRTTLRNIMRGEEMALSRAEQSILREHFPNMIATGINPHSELAIELRHALRRADRQQAASTPARTPTRPPAARTPTQSSSSSSQRSLFGRFARLMTPDQRRSSNASTSQTPVDRSPPRVNQVPIRPDRAAMRNRGNNQAAAALQGLVQQGVNLEDLRTALERHLLRHQPIPLDIAYALQSVGIPPSVDTAESLVESPLMDLSVALHRVLGPRPVSAPPRPAVPVHPPAASRRPDGARSSALRVIPEREDYENNVAYGMRLLNLNPGVGVRRVVAAFITDPADRPAVVDDIRAARDPITSQFNQLRTVSKAVVESQNPPFRDAEHHHPDDATHCLFGEPLSLENSRQQVIGLAGNPTDTSELYSQQGNKDLVFMDMKKLAQFLAGKPEHPMNRQPLDARTIANYAFRIVP
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
59269.5 544 10.36 -0.611 56.78
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.