Effector profile
PlantPEAD ID: PlantPEAD34423 Uniprot ID: A0A3M6FL99 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: pv. tabaci strain ICMP 4525 Other name: Pseudomonas amygdali pv. tabaci
Gene name: NCBI Gene ID: RBVA01001088
Entry name: A0A3M6FL99_PSEAJ Protein name: Type III effector HopAB2
DOI:
Gene/Protein information
Gene sequence:
GTGGAACCTGTTCTTTCCTTATCGCCACACATTGCTGATTTTGCGGGTGAGTCAGCCCGCAGCCAGAAAACCGCGGAGGATCAGCATATGGTGGGTATCAATAGAGCGGGGCCATCGGGCGCTTATATTACCGGGCACACAGACCCCGAGCCTGCATCAGGGCGCGCACGCGAATCCAGCAGCGGCGCCAGCTCTTCGAACAGTCTGCAGGTGCCGCCGCCCCCTTCAGAGACTTCCGCTTCGCAGGCGCGAGATCGGCGTGAGAGGCTTTTGCGGTCCAGACCGCTGTCGCGCGAAACCAGGGAGTGGCTGGAGCAGGGCATGCCGCCAACGGCGGAGGCTGAAGTGCGTAGCAGACCGCATGGGTCTGCCGATGCCGCAGCACCGCATGCACCTGCCGAGACAAGACCCAGGCCGCAGCACGCAGGGGTGACGGCACACGCCAATAGCATCGTTCAGCAATTGGTCAGCGCGGGCGCTGATCTTGCCCATACTCGTACCACGCTGCGCAATATCATGAGAGGCGAAGAGATGGCTCTTTCTAGAGCCGAACAGAGTATTTTGCGCGAGCATTTCCCTAACATGATTGCGACTGGAATCAACCCCCATTCAGAGCTCGCTATCGAGCTCCGTCATGCGCTCCGTAGAGCGGATCGCCAACAGGCGGCGTCAACTCCAGCAAGGACACCGACGCGGCCCCCGGCGGCCCGTACCCCTACGCAATCATCATCGAGTAGCAGCCAGCGTTCATTATTTGGGCGGTTCGCCCGGCTGATGACGCCTGATCAGAGACGTTCGTCAAACGCATCGACCTCTCAGACACCGGTAGACAGAAGCCCGCCACGCGTCAATCAGGTACCCATACGCCCCGACAGGGCTGCGATGCGTAATCGTGGCAATAACCAGGCCGCCGCAGCCTTGCAGGGATTGGTTCAACAAGGGGTCAATCTGGAAGACCTGCGCACGGCGCTTGAAAGACATCTATTGCGGCACCAACCGATCCCCTTGGATATAGCGTACGCGTTGCAGAGCGTGGGCATTCCCCCAAGTGTTGACACGGCTGAGAGCCTTGTGGAAAGCCCGCTGATGGATTTGAGTGTTGCGCTGCACCGCGTGCTTGGGCCACGTCCCGTTAGTGCTCCGCCTCGCCCAGCCGTTCCGGTGCATCCTCCAGCTGCCTCCAGGCGACCAGATGGCGCGCGTTCCAGCGCATTGCGGGTAATTCCGGAGCGGGAGGATTATGAAAATAATGTGGCTTACGGAATGCGCTTGCTTAACCTGAACCCGGGGGTTGGAGTAAGGAGGGTTGTTGCAGCCTTTATAACCGATCCGGCGGACCGGCCGGCAGTTGTGGACGATATCCGCGCAGCCCGGGACCCTATAACCTCGCAATTCAATCAACTGCGTACGGTCTCCAAGGCCGTTGTTGAATCCCAAAATCCGCCCTTCAGGGACGCGGAACACCATCACCCGGACGATGCGACCCATTGCCTTTTTGGTGAACCATTGTCGCTGGAAAATTCTCGTCAGCAGGTGATCGGCCTGGCGGGGAATCCGACGGACACGTCGGAGCTTTACAGTCAGCAGGGAAATAAGGACCTGGTGTTCATGGATATGAAAAAACTTGCCCAATTCCTCGCAGGCAAGCCTGAGCATCCGATGAACAGACAACCGCTTGACGCCAGAACCATCGCTAACTACGCGTTTAGAATCGTGCCCTGA
Protein sequence:
MEPVLSLSPHIADFAGESARSQKTAEDQHMVGINRAGPSGAYITGHTDPEPASGRARESSSGASSSNSLQVPPPPSETSASQARDRRERLLRSRPLSRETREWLEQGMPPTAEAEVRSRPHGSADAAAPHAPAETRPRPQHAGVTAHANSIVQQLVSAGADLAHTRTTLRNIMRGEEMALSRAEQSILREHFPNMIATGINPHSELAIELRHALRRADRQQAASTPARTPTRPPAARTPTQSSSSSSQRSLFGRFARLMTPDQRRSSNASTSQTPVDRSPPRVNQVPIRPDRAAMRNRGNNQAAAALQGLVQQGVNLEDLRTALERHLLRHQPIPLDIAYALQSVGIPPSVDTAESLVESPLMDLSVALHRVLGPRPVSAPPRPAVPVHPPAASRRPDGARSSALRVIPEREDYENNVAYGMRLLNLNPGVGVRRVVAAFITDPADRPAVVDDIRAARDPITSQFNQLRTVSKAVVESQNPPFRDAEHHHPDDATHCLFGEPLSLENSRQQVIGLAGNPTDTSELYSQQGNKDLVFMDMKKLAQFLAGKPEHPMNRQPLDARTIANYAFRIVP
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
62393.9 573 9.94 -0.614 58.14
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.