Effector profile
| PlantPEAD ID: PlantPEAD34428 | Uniprot ID: A0A3M4CGV7 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. lachrymans strainICMP 826 | Other name: Pseudomonas amygdali pv. lachrymans |
| Gene name: | NCBI Gene ID: RBQI01000610 | |
| Entry name: A0A3M4CGV7_PSEAV | Protein name: Type III effector protein AvrPto1 | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TTAGTTTCCCCAAGGCCTTGGAGAAAGTGTCGCCATTCTGATTGACCCACTCGGATTTATAGTCGTGACAAAACGCTCTGGAGAAGCTGGGATTCCAGTATGCACTTCCATCGCGTGTTGTAGAGCTTCCCGCATATCACTCCAGGCGGACATATCGTCTCGCATCGACTGAACGTTTTCATGGGGCAGCATTCCAGGATTGACACCTGAAGCTCCTGTCATATATCTATGCTGCATATCGGCCATTTGCAACGTTCGCTGAGTGTGATTGTAGAGCCTGTTAAACCGGTTTTGTAAGGCTTGGGGCGCTTGATTAGTGATGAATTCATGCTGGTCTCTAGGTACGCCCGCTGCATCTGCCAGTTGATGCCTGACGTTAAGTAACTGGTTGGCCGTTACATTACTGTCGTCTCCTGAGTTGTTGCTGACTCGGTCCGGAGAGTTTACCTGATGGGCCATCCTGGATCCGCCAACACATATATTTCCCATTTCAAATATCCTCTTCAATACGGTATCCGTGACCGCGTATGAGTGGTCCTTGGCAGGATTTGGTTCCAT
Protein sequence:
MEPNPAKDHSYAVTDTVLKRIFEMGNICVGGSRMAHQVNSPDRVSNNSGDDSNVTANQLLNVRHQLADAAGVPRDQHEFITNQAPQALQNRFNRLYNHTQRTLQMADMQHRYMTGASGVNPGMLPHENVQSMRDDMSAWSDMREALQHAMEVHTGIPASPERFVTTINPSGSIRMATLSPRPWGN
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 20618 | 185 | 6.49 | -0.692 | 35.34 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR036532,IPR020996
Pfam: PF11592
SMART:
KEGG:
PRINTS: