Effector profile
| PlantPEAD ID: PlantPEAD34435 | Uniprot ID: A0A3M5VIW0 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. avii strain ICMP 14479 | Other name: |
| Gene name: | NCBI Gene ID: RBUA01000600 | |
| Entry name: A0A3M5VIW0_PSESX | Protein name: Avirulence protein AvrRps4-like C-terminal domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCAGGCGCAGCGACTGCGCCAATTGGGTGAGAGGCCAGCTCACCAAGACCGGCAGAACACAATTTTAGTTAAAGCTTTTGATGCTCAACGCTTAGACATCAACACCCACGCGGGCCCTTCCAACAGCCCCCACCTGAACGCTCTCAACCAGCTCCAACAACGAAACTTCAAACCTGCGGTTGGTGGGCTAGAAATCCCGGTTACACCCAACTCCCTATTAGGCGGGGGCAAACGAGTCTCTCATGTCGGCTCATCGTCACGCGACATACAAGTCTGCCCACGTGGGGCCGCTGCTGAATTGAGACAAGAAATACAGGACAAACAAACCTTTGTTAACGACCTTACTGAAGAGCTTGAAGACGCTACAGAAGAGGCCAATCCTGACGAAATAGCGAATACAACACAACAGCTGCGCCAAGCAAGAGCTGACCTTGTTGAATTACAGAGACGCCTTACGATGCTCGCACACGAAGACCGCAGAATTAACCAATAA
Protein sequence:
MQAQRLRQLGERPAHQDRQNTILVKAFDAQRLDINTHAGPSNSPHLNALNQLQQRNFKPAVGGLEIPVTPNSLLGGGKRVSHVGSSSRDIQVCPRGAAAELRQEIQDKQTFVNDLTEELEDATEEANPDEIANTTQQLRQARADLVELQRRLTMLAHEDRRINQ
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 18353.4 | 164 | 6.21 | -0.813 | 55.41 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR048927
Pfam: PF21611
SMART:
KEGG:
PRINTS: