Effector profile
PlantPEAD ID: PlantPEAD34466 Uniprot ID: A0A0N8T1W1 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: pv. tagetis strain ICMP4091 Other name:
Gene name: NCBI Gene ID: LJRM01000183
Entry name: A0A0N8T1W1_9PSED Protein name: Type III effector HopT1-1
DOI:
Gene/Protein information
Gene sequence:
TCATGACTTTTGAGCCGCCTGCCTGACGACTTGCCTTTGCGCGAGATTGTCTATACCAAACCCGCGACCTTTAATTGAATTACTGAAAGGCTCGCTATAAAGCGTGTCGTCCCATTGTTCCGGCATTCCATGGGGAGCGACACCCAGATTCACTTCAAGCATCGAATGGTGGCTGTCCTGACCGAAATAGGCATAGCAGACATACCGCACAAGCTCTTTCAGGTTCTGCTCACTCTCAATACCCAGGCTTTTCAAACAAGCCGGTGCCAGAAAACGCGCAACAGCGACCATGCGCGAAGCGGTACCGGCCGGGCCGGCGATAATAGGCTTTGCAGAAACTTCAGCACGCTTTGCGAAATCGCTGTTCGGTTTTACACTCCATACACTGCTGCCATGGCTTCTCAGAACCTGCAGATCAGATTCCTCAGGCAAACCCTTATTAAAGCCCACTTTCGCTTGGGCAGACGGATGATTAACCGGATTGTGACGATGAAAAGCCAACTCACGTGCACTGATCAGCGTCTGGTTAAGATTTGATGCCGTTTCATACCGAGCTTTGCCAATCTGTTCACGACTTTCGCTAGCCCGTGCAGCCCACCCTGACATGACATAAAGATCGCCTTCACAAGCTTTCAGATAATTGAGGTCTACCACACCGTCGAGCTTTTGCTGCAAGGCTGGATCGCTAACCACTCGTTCAAGCAAATGTTTGAAGTTGTTACTGAGCATAAGGCTAATGAACAGTGTACCTTTCTCTCGGAGCGTCCCGACGCGACTGGTGGCCCGGATAGCTGCCGCATTCCAACCAACACTCCCCATTACATCAAAGCGCGGGCTAAGCACGCCACTGCCGTGTCGATTACTGTCATGAGGGCGAGAGACTGCCTGGACGATTTCGGCCCACCCCTTAACCTCCCCATGAGCCTTGACGAAAACGTCTGTCAACGTGTCAACCAGCGCACTTATTGTCATTTTCGCTGCCGGGTGGTCGGCAATGTGTTCGATGACTGCTTTTTCAATCTTGCTGTTGCGCTGGATTTCGCTGGAAACCGGCTGTGATTTCTGCGCCGAAGTTTCCGTTCCCGCATCCCCGACGAGATTTGTACTGGGTATCGAGTGATTGCTGACTGTTTTCATCAT
Protein sequence:
MMKTVSNHSIPSTNLVGDAGTETSAQKSQPVSSEIQRNSKIEKAVIEHIADHPAAKMTISALVDTLTDVFVKAHGEVKGWAEIVQAVSRPHDSNRHGSGVLSPRFDVMGSVGWNAAAIRATSRVGTLREKGTLFISLMLSNNFKHLLERVVSDPALQQKLDGVVDLNYLKACEGDLYVMSGWAARASESREQIGKARYETASNLNQTLISARELAFHRHNPVNHPSAQAKVGFNKGLPEESDLQVLRSHGSSVWSVKPNSDFAKRAEVSAKPIIAGPAGTASRMVAVARFLAPACLKSLGIESEQNLKELVRYVCYAYFGQDSHHSMLEVNLGVAPHGMPEQWDDTLYSEPFSNSIKGRGFGIDNLAQRQVVRQAAQKS
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
41261.7 379 8.84 -0.306 40.43
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.