Effector profile
PlantPEAD ID: PlantPEAD34468 Uniprot ID: A0A0P9MS64 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: pv. castaneae strain ICMP9419 Other name:
Gene name: NCBI Gene ID: LJQD01000441
Entry name: A0A0P9MS64_PSESX Protein name: Type III effector HopT1-1
DOI:
Gene/Protein information
Gene sequence:
ATGATGAAAACAGTCAGCAATCACTCGATACCCAGTACAAATCTCGTCGTGGATGCGGGAACGGAAACTTTGGCGCAGAAATCCCAGCCGGTTTCCAGCGAAATCCAGCGTAACAGCAAGATCGAAAAAGCAGTCATCGAACACATTGCCGACCACCCGGCAGCGAAAATGACAATAAGCGCGCTGGTTGACACGTTGACAGACGTTTTTGTCAGGGCTCATGGGGAGGTTAAGGGGTGGGCCGAAATCGTCCAGGCAGTCTCTCGCCCTCATGACAGTAATCGACACGGTAGTGGAGTGCTCAGCCCGCGCTTTGATGTAATGGGGAGTGTTGGTTGGAATGCGGCAGCTATCCGGGCCACCAGTCGCGTCGGGACGCTTCGAGAGAAAGGTACACTGTTCACTAACCTTATGCTCAGTAACAACTTTAAACATTTGCTTAAACGAGTGGTTAGCGATCCAGCCTTGCAGCAAAAGCTCGACGGTGGGGTAGACCTCAACTATCTGAAGGCTTGTGAAGGCGATCTTTATGTCATGTCAGGGTGGGCTTCACGGGCTAGCGAAAGTCGTGAACAAATTGGCAAAGCCCGGTATGAAACGGCATCAAATCTTAGCCAGACGCTGATCAGTGCACGTGAGTTGGCTTTTCATCGTCACAATCCGGTTAATCATCCGTCTGCCCAAACGAAAGTGGGCTTCGATAAGGGTTTGCCTGAGGAATCTGATCTGCAGGTTCTGAGAGGCCATGGCAGCAGTGTATGGAGTGTAAAACCGGGCAGCGATTTCGCAAAGCGTGCTGAAGTTTCTGGAAAGCCTATTATCGCCGGCCCGTCCGGTACCGCTTCGCGCATGGTCGCTGTTGCGCGTTTTCTGGCACCGGCTTGTTTGAAAAGCCTGGGTATTGAGAGTGAGCAGAACCTGAAAGAGCTTGTGCGGTATGCCTGCTATGCCTATTTCGGTCAGGACAGCCACCATTCGATGCTTGAAGTGAATCTGGGTGTCGCTTCCCATGGAATGCCGGAACAATGGGACGACACGCTTTATAACGAGCCTTTCAGTAATTCAATTAAAGGTCGCGGGTTTGGTATAGACAATCTCGCGCAAAGGCAAGTCGTCAGGCAGGCGGCTCAAAAGTCATGGGCCATTGAGTCTCTCAAGGAAAGGCTTGATGCATAG
Protein sequence:
MMKTVSNHSIPSTNLVVDAGTETLAQKSQPVSSEIQRNSKIEKAVIEHIADHPAAKMTISALVDTLTDVFVRAHGEVKGWAEIVQAVSRPHDSNRHGSGVLSPRFDVMGSVGWNAAAIRATSRVGTLREKGTLFTNLMLSNNFKHLLKRVVSDPALQQKLDGGVDLNYLKACEGDLYVMSGWASRASESREQIGKARYETASNLSQTLISARELAFHRHNPVNHPSAQTKVGFDKGLPEESDLQVLRGHGSSVWSVKPGSDFAKRAEVSGKPIIAGPSGTASRMVAVARFLAPACLKSLGIESEQNLKELVRYACYAYFGQDSHHSMLEVNLGVASHGMPEQWDDTLYNEPFSNSIKGRGFGIDNLAQRQVVRQAAQKSWAIESLKERLDA
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
42666.2 391 8.83 -0.341 40.82
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.