Effector profile
PlantPEAD ID: PlantPEAD34471 Uniprot ID: A0A3M3Z1Y7 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: pv. philadelphi strain ICMP 8902 Other name:
Gene name: NCBI Gene ID: RBQB01000174
Entry name: A0A3M3Z1Y7_9PSED Protein name: Type III effector HopT1-1
DOI:
Gene/Protein information
Gene sequence:
ATGATGAAAACATCCAGCTATAACTCGATACTCGGTACGTATAGCGCCGTGGGGGCGGGGACGGAAATTTCGGCACAGATACGCCCCCAGGCTCTCAGTGGTATACAGCGCAACAGCAGGATCGAAAAAGCAGTCATCGAACACATCGCTGACCATCCGGCAGTGAAGGTTGTAATGGGCGCGCTGATGGAGGCATTGACAGACGTTTTCATCAAGGCTCATGGAGAGGTTAAGGGGTGGGCCGAAATCGTCAAGGCAGCATGTCGGCCTCATGATAGTAATCGACACGGCAGTGGAGTGCTCAGTCCGCGCTTTGATGAAATAGGGAGTGTCGGCTGGAATGCGGCAGCTATCCGGGCGACCAGTCGCGCCGGGACCCTGCGTGAGAAAGGCACGCTGTTCTTTAGCCTTATGCTCAGTGACAACTTCAAGCATTTGCTCGGACGGGTGGTTAGCGATCCCGACTTGCAGCGCAAGCTCGAAGGGGGGGTGGACCTCGGCTATCTGAAAGCCTGCGAAGGCAATCTTTTAGTCACGTCAGGGTGGGCTGCCCAGGCTGGCGAAATTCGTGAGAAGATTGGCCAGGCCCGGTATGAAACGGCATCAAATCTCAACAAGACGCTGATCAGTGCACGTGAATTGGCTTTTCATCGCCACAATCCGGTTAATCATCCGTCTGCCCAACCGAACGTGGGCTTTGATAAGGATTTGCCTGAGGAATCTGATCTGCAGATTCTGAGAGGCTATGGCAGCAGTGTATGGGGTGTGAAGCCGGACAGTGATTTCGCCAGGCGCGCGGAAGAGTCTGCAAAGCCTGTCATTGCCGGCCCGTCCGGCACCGCTTCGCGCTTGGTATCTGTGGCACGCTTTCTGGCACCAGCGTGTTTGAAACGCCTGGATATCGAGAGTGAGCAGGGTTTTAAGGAGCTTGTGCGGTATGCCTGCTATGCCTATTTAGGTCAGGACAGCCACCATTCGATGCTTGAAGTGAATCTGGGTGTTGCTCCTCATGGGATGCCGGAGCAATGGGACGACACGCTATATACCGAGCCTTTCAGTCATTCGATAAAAGGTAATGGGTTTGGTGTTGACAATGATGCGCAAATGCGAATATTCAGCCAGACTGCTCAAATACCATAG
Protein sequence:
MMKTSSYNSILGTYSAVGAGTEISAQIRPQALSGIQRNSRIEKAVIEHIADHPAVKVVMGALMEALTDVFIKAHGEVKGWAEIVKAACRPHDSNRHGSGVLSPRFDEIGSVGWNAAAIRATSRAGTLREKGTLFFSLMLSDNFKHLLGRVVSDPDLQRKLEGGVDLGYLKACEGNLLVTSGWAAQAGEIREKIGQARYETASNLNKTLISARELAFHRHNPVNHPSAQPNVGFDKDLPEESDLQILRGYGSSVWGVKPDSDFARRAEESAKPVIAGPSGTASRLVSVARFLAPACLKRLDIESEQGFKELVRYACYAYLGQDSHHSMLEVNLGVAPHGMPEQWDDTLYTEPFSHSIKGNGFGVDNDAQMRIFSQTAQIP
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
41237.6 379 6.68 -0.282 40.43
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.