Effector profile
| PlantPEAD ID: PlantPEAD34486 | Uniprot ID: A0A5E4VPL8 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 1891094 | Pathogen type: Bacteria |
| Species: Pandoraea fibrosis | Strain: LMG 31113 | Other name: |
| Gene name: | NCBI Gene ID: CABPRW010000006 | |
| Entry name: A0A5E4VPL8_9BURK | Protein name: Effector protein YopJ | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGATGTCTTCACCCTGCGGCCACGCGCCGGCCGCTACACACGTCCCACGCCCCTCGCTCCCCTCGCTCCCCTCTTGCCCGGTTACCCTGAGCCACCCCGAAGGCCATGCGCTGCCCGCAAGACGTTTCAGTGCGTCGCTGGAGTTTGCCGGGAACGTTCCGCCCTCGCCCCCCGACGCCCTGACACTGCCCGAGACGCCGACGCACTACTACAACTTCGCCGTCGCCTTCCTGAAGGCAAACCGGCAGAGTCTCGATATGTACTGGGCTGACCGGGGCGCCATCCCCGCACTGATCCGCTCGGAGATGTTGCTTCATCCCGGCTTGCGAATCACCCATCACGAGACACCCGGTGATTTTGCGAAGTACGTGAATGAGCAATGCCTCACAGGAGCGCCGCTCCGCGAGCAATGTCTGGTCGAGCTTAGCCCCATGGAAGGGCACTGTGTAGGCGTCGATCTGCGCATCGACTCGGGCGAGCCTACCGTCATCGCCGTCGAATCCAGCACGCTGAACGCGACAGGCTCGGCCATGCTGCTCGTGCGGTTAGCCGCAGCCCTGAAGCAAACCGTAACGTGCGTCGCTCGCAACGGCCTTGACAGGCACTTGATGTTCTTCGAGACGGGCGCCCAGCAAAGCCCCATCGACTGCGCCATGTTCAGCCTGTGTGCGTGCAAATCCATATTCCGGAATGCCGACGCCTTCACGTTGTTGCACACACGCCTGCGAGCGGGCGAGTTCAGCGAGATGCTGGGCAAAGGTTATGTGGCCAGCCACGAGGCTGACCTGATGCTGCCGTCGGCGCTCATGCAACATACGCAGTCGTCGACGCGACTCGCCCTGCATGCGCATCGCCGCATCCAGCACGATCCCGCGCAAGCGCAAACGGTCGACAGGCTGATCCGGCGTCAGAAGGGCCTTGTCTTCGCTCGCGACGACCGGACTTACAGTGTTTCGATTGAAATGGCGAGGATCAAGATGGCAGGGCGCGCGCTCTCGCTGCCCACCGAAAATCCGACATTACTGGCGCCGCCGTGTCGCGACGACTTTCTGTCGTCTACGGAATCGCAATAG
Protein sequence:
MMSSPCGHAPAATHVPRPSLPSLPSCPVTLSHPEGHALPARRFSASLEFAGNVPPSPPDALTLPETPTHYYNFAVAFLKANRQSLDMYWADRGAIPALIRSEMLLHPGLRITHHETPGDFAKYVNEQCLTGAPLREQCLVELSPMEGHCVGVDLRIDSGEPTVIAVESSTLNATGSAMLLVRLAAALKQTVTCVARNGLDRHLMFFETGAQQSPIDCAMFSLCACKSIFRNADAFTLLHTRLRAGEFSEMLGKGYVASHEADLMLPSALMQHTQSSTRLALHAHRRIQHDPAQAQTVDRLIRRQKGLVFARDDRTYSVSIEMARIKMAGRALSLPTENPTLLAPPCRDDFLSSTESQ
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 39010.8 | 357 | 6.96 | -0.136 | 50.46 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR005083
Pfam: PF03421
SMART:
KEGG:
PRINTS: