Effector profile
| PlantPEAD ID: PlantPEAD34505 | Uniprot ID: U3M980 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 4787 | Pathogen type: Oomycota |
| Species: Phytophthora infestans | Strain: Race 1.2 | Other name: Potato late blight agent, Botrytis infestan |
| Gene name: Avr3a | NCBI Gene ID: KF154422 | |
| Entry name: U3M980_PHYIN | Protein name: RxLR effector protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
CCATGCGTCTGGCAATTATGCTGTCTACTACGGCTGTCGCCACTTACCTTACAACCTGCAGTGCAGTCGACCAAACCAAGGTTCTGATGTATGGGTCGCCAGCTCACTACATACACGATTCAGCCGGCAGAAGACTTCTTCGCAAGAACGAAGAGAGTGAAGAAACGTCTGAGGAGCGAGCCCCTAATTTCAATTTGGCGACTTTAAATGAGGAGATGTTTGATGTGGCTGCGTTGACGAAGAAAGCAGATGCCAAAAAGCTAGCGAAACAGCTTATGGGTAATGATAAGCTGGCGGATGCTGCATACATGTGGTGGCAGCACAACAGGGTTACGCTAGACCAGATTGACACGTTCCTGAAGCTTGCAAGCCGCAAGACGCAAGGCGCAAAGTACAATCAGATCTACAATAGCTACATGATGCACCTGGGGCTCACTGGATATTAG
Protein sequence:
MRLAIMLSTTAVATYLTTCSAVDQTKVLMYGSPAHYIHDSAGRRLLRKNEESEETSEERAPNFNLATLNEEMFDVAALTKKADAKKLAKQLMGNDKLADAAYMWWQHNRVTLDQIDTFLKLASRKTQGAKYNQIYNSYMMHLGLTGY
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 16676.1 | 147 | 8.61 | -0.431 | 42.92 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR031825
Pfam: PF16810
SMART:
KEGG:
PRINTS: