Effector profile
| PlantPEAD ID: PlantPEAD34600 | Uniprot ID: W2LKN0 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 4792 | Pathogen type: Oomycota |
| Species: Phytophthora parasitica | Strain: CHvinca01 | Other name: Brown rot and root rot of citrus agent, buckeye rot agent, pineapple heart rot agent, pistachio foot rot agent, sesame blight agent |
| Gene name: | NCBI Gene ID: KI678612 | |
| Entry name: W2LKN0_PHYPR | Protein name: RxLR effector protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
CTAACTTGACTCGAATTTATCGGCATTGCGCTTAAGGAAATCACGGAAATCACGCTTCACCCTATCGCTGGTCAAGAATTTCTTACGTACCAATAGTGCGAAAACATTGGGACTCGTCCTCTCAACCACCCACTTTTTGAATTGCAATTCTTGCAAATCTGCGATGTATCCTTTTGTGCTTGCAGTGTCAGCTCGGCGTTTCGAATTGGCAAGCATTCGTGCAAGTGTGGCATCGTCGTAGTGTCTCTCTAGCTGTCTGATAGTAGCAAATTCATCTGAAGTCTTCCTGTAACTCTCCAACTTGAGCACATAAGCCGCCCAGGTAGAAAATGTCGGGCTTTCTAAAACCTTGTCGCCCTTCTCGTTCAATTTGAGCATTTTAAACAAGTCGTCTGAGGTATGTCCATTCATCCGCCAAATATCCATTTCCAGTTTTGCTGCGATGTCTTTGGTAAGCTTACTGTCGTCTCCTTTCGCCCTCGCAAAAGCATTTGTCAAACCAACATCCCCCAGTCGATTCCTCAGCACTGAGAACATTTCCTCATGTGAGTTACCTCTCTGCTTGTTCAGATACGCGACCCAAGTGCTCCACACTGGGCTTTCAAATAATTTGTCTCCTTCCTTGTCGAGTCCGATATTTTTGAAGACATCATCGCCACTCTTTTCAGCAGTCACCCATTTCTCGAGCTGTAGTTCCTCCATTTTCTTGGCAATAAACGCGGTATTAGTGTCGTCCTTTGCAGAGCCAATCATCTTTGCTAGTTTTGCTTCATCGAAGCCAGTCGACTTGATCGCCAAGAACAGCAACTCATACGGATCCTTCTTCAGCTTTTCCACGTAAGAAACCCAAGTGCTCAACACTGGACTTTTGAGAAGAGTAAGCCCTTCTTCGTTCAACTTGAGAAACCGGAACACGTCGATAATTGATTTTTCGTCTTTCATCCATTTCTCAAGCTGCAGCGTCTCCAATTTCTCGGCAATCGCTCTCGAACTAGCGTCGTTCTTTGACAGAACAAGCATTTTCGCTAGTTCGACATTGTCATAGCGCCGCCTTAGTTTGAATAGCAGGAAGTCGTAGGGATCCTTGCCCCGTTTTATTACGAAGTCCATCCACGTACTCAACTTCGGACTTTTCAGAATATTGGTGCCTTCTTCATCGAGTTGTTGAAGCTTAAAAACCCAATCCTCAGTTTTTCTTTCGGCAATCCAACGGTCTACCTTGCGTTGTTGGGCTTTTGTCTGCACACCTTCTGTTAATTTCTGCAGTTTCTTCGCTCCAAAATCTTTTATCTTCGTACCGGTAATACCAAAGATAGCTCTATCTTC
Protein sequence:
EDRAIFGITGTKIKDFGAKKLQKLTEGVQTKAQQRKVDRWIAERKTEDWVFKLQQLDEEGTNILKSPKLSTWMDFVIKRGKDPYDFLLFKLRRRYDNVELAKMLVLSKNDASSRAIAEKLETLQLEKWMKDEKSIIDVFRFLKLNEEGLTLLKSPVLSTWVSYVEKLKKDPYELLFLAIKSTGFDEAKLAKMIGSAKDDTNTAFIAKKMEELQLEKWVTAEKSGDDVFKNIGLDKEGDKLFESPVWSTWVAYLNKQRGNSHEEMFSVLRNRLGDVGLTNAFARAKGDDSKLTKDIAAKLEMDIWRMNGHTSDDLFKMLKLNEKGDKVLESPTFSTWAAYVLKLESYRKTSDEFATIRQLERHYDDATLARMLANSKRRADTASTKGYIADLQELQFKKWVVERTSPNVFALLVRKKFLTSDRVKRDFRDFLKRNADKFESS
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 51134.8 | 441 | 9.35 | -0.59 | 31.86 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: