Effector profile
PlantPEAD ID: PlantPEAD34799 Uniprot ID: A0A1J0EM91 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 104087 Pathogen type: Bacteria
Species: Pseudomonas frederiksbergensis Strain: ERGS4:02 Other name:
Gene name: NCBI Gene ID: CP017886
Entry name: A0A1J0EM91_9PSED Protein name: Ribosomal RNA small subunit methyltransferase E
DOI:
Gene/Protein information
Gene sequence:
TTAGAAATCGCCCCACAACTGCTGAGCCACGGCCAACGCCACCACGGGCGCGGTTTCGGTGCGCAGCACTCGCGGGCCGAGACGGGCGGAATGGAAACCGGCGCTTTGGGCCTGATCGACTTCCACGTCCGACAACCCGCCTTCCGGGCCGATCAGGAACGCCAGTGTCGAAGGTTTTGCATGGCTGACCAGTGGCTCAGCCACCGGGTGCAGCACCAGTTTCAGGTCGGCCTCGGATTGTTTGAGCCAGTCGGCCAGCAACAGGGGGGGGTGGATCACCGGTACTCGCGAACGACCGCATTGTTCGCACGCGCTGATAGCGACCTGACGCCAGTGTTGCAGGCGTTTGTCAGCGCGTTCGTCCTTGAGCCGGACTTCGCAGCGTTCACTGAAAATCGGGGTGATTTCAGTCACGCCCAACTCGGTGGCTTTTTGAATCGCCCAGTCCATCCGCTCGCCCCGGGACAAGCCCTGGCCCAGATGAATCTGCAACGGCGACTCGACTTGCCCGACGAAGCTTTCCGTTAACGCCACGCGCACGCGTTTCTTGCCGACTTCCGCCAGCGTGCCGCGAAATTCCTGGCCTGAACCGTCGAACACTTGCAGCGCATCGCCCTCGGCCATGCGCAGCACGCGACTGATGTAGTGCGCCTGGGCCTCTGGCAATTCATGCTCGCCGAGGCTCAAGGGGGCGTCGATAAAGAAGCGGGACAGTCTCAT
Protein sequence:
MRLSRFFIDAPLSLGEHELPEAQAHYISRVLRMAEGDALQVFDGSGQEFRGTLAEVGKKRVRVALTESFVGQVESPLQIHLGQGLSRGERMDWAIQKATELGVTEITPIFSERCEVRLKDERADKRLQHWRQVAISACEQCGRSRVPVIHPPLLLADWLKQSEADLKLVLHPVAEPLVSHAKPSTLAFLIGPEGGLSDVEVDQAQSAGFHSARLGPRVLRTETAPVVALAVAQQLWGDF
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
26393.2 239 6.08 -0.143 46.51
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.