Effector profile
| PlantPEAD ID: PlantPEAD34999 | Uniprot ID: A0A3M4W1N8 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 36746 | Pathogen type: Bacteria |
| Species: Pseudomonas cichorii | Strain: ICMP 6917 | Other name: |
| Gene name: | NCBI Gene ID: RBRY01000079 | |
| Entry name: A0A3M4W1N8_PSECI | Protein name: Carrier domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGAAATGGCGGGTATCTGACATGGAAAAGTCTGCAGCAGAACGTATTGCCCAGCGCTTCGTCGGTTTGCCCGTGGAGCAGCGCCGCCAGATTCTCACCAAGATGAGCGAGACCGGGCAAAGCTTCAGGTTGTTGCCCATTGCGGTGACCCGCCATGACGTGCAACGCATCCCGTTGTCCTACGCCCAGCAACGCATGCTGTTCCTCTGGCAACTGGAGCCGGGCAATATCGCCTACAACGTGCCGCTGGCTGTGCGCCTGAATGGCCCGCTGGACGAGCGCGCTCTGGCACAGGCCCTTGAGCGGCTGGTGCAACGCCATGAAACCCTGCGTACCCGGTTCGTGTCGGTGGAGGGCGAGTTTCATCAGGAAATTCTTGAGCAGGCGACCGTCGCACTGGACGTCGCCTATGCCAGCCACGACGACATTGAGGCGCAGGTCAAAGCCGAATTGCAGGCGCCCTTTGACCTGCTGAGTGGCACGCTGCTGCGGGTGAAACTGTTCCGCCTGAGCGACGCCGAGCATGTGTTGACCGTGTGCATGCATCACGTGGTCTCCGATGGCTGGTCGGGTGAGTTGCTGATTCGCGAATTCGTTCAGCTCTATCAGGCGCAGGTCGCCGGACAGCCTGCTCAATTGCCGCCACTGGCGATTCAATATGCCGACTACGCCATCTGGCAGCGCGCCTGGCTGGAAGCCGGGGAGGGTGAGCGTCAACTCGAATACTGGAAGCAACAACTGGGCACCGAGCATCCATTGCTGGAATTGCCGCTGGACCATGAACGGCCTGTCCAGCCGAGTTATCGCGGAGCAATCGTGCGGGCGGACCTGCCGGAAGGGCTCTCTGCCCGGCTCAAGACCCTGGCGCGCAACAACGGCCAGACGGTGTTCATGTTGACCCTGGCTGCGTTGTCGGTGGTGCTGTCGCGCTACAGCGGTCAGGCCGATATCCGCATCGGCGCGCCCAATGCCGGTCGTACCCGCAATGAGCTGGAAGGCCTGATCGGCTTCTTCATCAATACCCAGGTGCTGCGCATTCAGGTGGATGAGCGCCAGACCTTCGTCGAGCTGCTGGACCAGGTCAAGAGCGTGGTGATGGGCGCGCAGTCCCATCAGGAGCTGCCGTTCGAGCATCTGGTGGATGCCCTGGCTCCAGAGCGTAACCTGGGCCACAACCCGCTGTTCCAGTTCAAGATCAACCAGCATGTGTTTGCCGGTGATGAAGGCAGCGCCGGTACGGCTGTGGCCGGGTTGACCGTGGCCGAGTTCCCGGTGGGCGGCGGTGATGCGCGTTTCGACCTGGCCTTTGACTTCACCGACACCCCGTCGGGGTTGCGCGGTTATTTCACCTACGCCACCGACCTGTTCGAGGCGTCGACCATCGAGCGTATCGCGGCGTCGTTGCAGAACGTGCTGGAAGCGCTGGTGGTGCATTCCGGCGAGCGCCTGGCGGATCATCCGCTTGCCGTGACGGCTCCGGTTGCACCCCGGACTGTCGATTTCGCCAGTTCCGATTTCCTGGCCCTGTGGCAAAAAGGCCTGCACGCCGGGCAGGGCAAGCCGGCATTGCGTGTTGGTCAGCACGTGCTGAGCTATGACCAGCTGGAACAGCGCTCCAGCCAGTTCGCCCGTTACCTGCAAGGCGAAGGCATTGCCGATGGCATGACCGTGGCACTGTGTCAGGACCGTTCAGTGGAGTGGGTGGTCAGCCTGTTGGCCGTACTGAAACTGGGTGCGGTGTACCTGCCGCTGGATACTGCGCAACCTGCCGAACGCTTGCAGCAACTGGCCAGGGACAGCGGCGCGGTGCTGCTGATCCACGCCCGAGGCGATGACAAGGCTGCCAGCCTGGGTGTCTGCCCGGTGCTGGCCTATGACGCCAGCCTGTGGGCCGATGTCGATACGAGCCCGTTGAATATTCAAGTGCTGCCGCAGCAACCGGCCTACATCATCTATACCTCCGGCTCCACCGGGCAGCCCAAAGGCGTGGTCATCAGCCATGGCGCGCTGGCCAACTACCTGCAAGGCGTGCTCCAGCGTCTTTCCCTGAGCGCCGAGGCGAGCATGGCCATGGTGTCCACCGTTGCCGCCGACCTGGGCCATACCCTGTTGTTCGGCGCCCTGGCATCCGGTCGTCAACTGCATTTGCTGTCCCATGAACAGGCATTCGATCCCGATGGTTTCGCCGCGTACATGGCCGAGCATCAGGTGGCAGTGTTGAAGATCGTGCCGAGCCATCTGCAAGGCTTGTTGCAGGCCACAAGGTCTTCCGACGTGCTGCCGGAGCAGATGCTGATCCTGGGGGGCGAGGCCAGTTCCTGGTCCTTGATCGAACAGATCAGAACCCTCAAACCGGGTTGCCGGATCGTCAACCACTACGGCCCGACCGAAACCACGGTAGGCATCCTGACCCATGAAGTGCAGGAAAAACTGGAGGCCTGTCGCAGCGTGCCGGTGGGACACCCCCTGGCCAACGGCAAGGCGCGGGTGCTGGATGCCTGGCTGAACCCGATGGCCGAGCGGGTGGCCGGTGAGTTGTATCTGGGTGGTCGCGGCCTGGCGCAGGGCTATCTGGGGCGTGCGGCCATGACGGCCGAGCGTTTCGTGCCGGACCCGGAAGGCGATGGCGAGCGTCTGTATCGCGCCGGTGACCGTGCGCGCCGGGTAGACGGTTTGCTGGAATACCTGGGCCGTGCCGACGATCAGGTAAAGATTCGCGGCTATCGGGTCGAGCCGGGTGAGGTCGGCCAGGTGCTGCAAGCGCTGGATGGCGTGGCCGAAGCCGTGGTGCTGGCCTTGCCACTGGAAAGCGACGAATCCCGCCTGCAACTGGTGGCCTATTGCGTGGCCGCTGCGGGCACGACGCTGCAGGTCGAAACTCTGCGCGAACAACTGACTGCCAGCCTGCCGGAATACCTGGTGCCCGCGCAGTTCGTGGTGCTGGAGCGTCTGCCGCTGACCGCCAACGGCAAGCTGGACAAGCGTGCGTTGCCCACGCCGGGTGTGGTCAAACAGCTCTACACCGCACCGGTCGGCGAGATCGAGGAAAAGCTCGCCGCCGTCTGGGCCGATGTACTCAAGCTGGAGAAGGTTGGCACGACCGATAACTTCTTCGAGTTGGGCGGGGATTCGATCCTCAGCCTGCAAATCATCGCCCGTGCCAAGCGTCAGGGCCTCAAGCTGAGCCCCAAGCAACTGTTCGAGAAACAGACCATCGCCCAGTTGGCGACAGTTGCCAAACTGATTCAGAAGAGGCCGGCTGCAGTCGTCGAGCAGGTGAGCGGCAACTTGCCGTTGCTGCCGATTCAGGCGCGTTTCTTCGAGATGAACATTCCCGAGCGCCATCACTGGAACCAGTCGGTGATGCTCAAGCCCAACAGTCCGCTGGAAGCCAGTCATCTGCTGGCGGCCTTGCAAGCTCTGATCGAGCAGCATGA
Protein sequence:
MKWRVSDMEKSAAERIAQRFVGLPVEQRRQILTKMSETGQSFRLLPIAVTRHDVQRIPLSYAQQRMLFLWQLEPGNIAYNVPLAVRLNGPLDERALAQALERLVQRHETLRTRFVSVEGEFHQEILEQATVALDVAYASHDDIEAQVKAELQAPFDLLSGTLLRVKLFRLSDAEHVLTVCMHHVVSDGWSGELLIREFVQLYQAQVAGQPAQLPPLAIQYADYAIWQRAWLEAGEGERQLEYWKQQLGTEHPLLELPLDHERPVQPSYRGAIVRADLPEGLSARLKTLARNNGQTVFMLTLAALSVVLSRYSGQADIRIGAPNAGRTRNELEGLIGFFINTQVLRIQVDERQTFVELLDQVKSVVMGAQSHQELPFEHLVDALAPERNLGHNPLFQFKINQHVFAGDEGSAGTAVAGLTVAEFPVGGGDARFDLAFDFTDTPSGLRGYFTYATDLFEASTIERIAASLQNVLEALVVHSGERLADHPLAVTAPVAPRTVDFASSDFLALWQKGLHAGQGKPALRVGQHVLSYDQLEQRSSQFARYLQGEGIADGMTVALCQDRSVEWVVSLLAVLKLGAVYLPLDTAQPAERLQQLARDSGAVLLIHARGDDKAASLGVCPVLAYDASLWADVDTSPLNIQVLPQQPAYIIYTSGSTGQPKGVVISHGALANYLQGVLQRLSLSAEASMAMVSTVAADLGHTLLFGALASGRQLHLLSHEQAFDPDGFAAYMAEHQVAVLKIVPSHLQGLLQATRSSDVLPEQMLILGGEASSWSLIEQIRTLKPGCRIVNHYGPTETTVGILTHEVQEKLEACRSVPVGHPLANGKARVLDAWLNPMAERVAGELYLGGRGLAQGYLGRAAMTAERFVPDPEGDGERLYRAGDRARRVDGLLEYLGRADDQVKIRGYRVEPGEVGQVLQALDGVAEAVVLALPLESDESRLQLVAYCVAAAGTTLQVETLREQLTASLPEYLVPAQFVVLERLPLTANGKLDKRALPTPGVVKQLYTAPVGEIEEKLAAVWADVLKLEKVGTTDNFFELGGDSILSLQIIARAKRQGLKLSPKQLFEKQTIAQLATVAKLIQKRPAAVVEQVSGNLPLLPIQARFFEMNIPERHHWNQSVMLKPNSPLEASHLLAALQALIEQH
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 125600 | 1145 | 5.68 | -0.041 | 37.51 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR010071,IPR036736,IPR025110,IPR045851,IPR020845,IPR000873,IPR023213,IPR001242,IPR009081,IPR006162
Pfam: PF00501,PF13193,PF00668,PF00550
SMART:
KEGG:
PRINTS: