Effector profile
PlantPEAD ID: PlantPEAD35500 Uniprot ID: A0A0P9LVP9 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 86840 Pathogen type: Bacteria
Species: Pseudomonas cannabina Strain: pv. alisalensis ATCC BAA-566 / CFBP 6866 / ICMP 15200 / BS91 Other name:
Gene name: NCBI Gene ID: LJPP01000192
Entry name: A0A0P9LVP9_PSEC1 Protein name: Pectate lyase
DOI:
Gene/Protein information
Gene sequence:
GGGTTCGTGGCGCGGATACAGGCCGTCTGGACATTCCCGGCAAAACGACCATCGTCGGCACGACCAGCACTGCCGAGATACGCGAGGGGTTTTTCTATGCCAAGGAGAACGATGTCATTATCCGTAACCTGACTATCGAGAATCCGTGGGACCCGGAACCGGTCTGGGACCCGACCGATGGCAGTTCGGGAAACTGGAACTCTGAATACGACGGGTTGACCGTCGAAGGTGCGAGTAATGTATGGGTTGACCATGTAACCTTTACGGATGGGCGCCGTACCGATGATCAGAATGGCACCGCCAACGGTCGCCCCAAACAGCATCACGACGGTGCACTCGACGTCAAGAACGGCGCCAACTACGTCACCATCTCCTATTCAATATTCAGGAACCACGAAAAGAACAACCTCATCGGTTCAAGCGACAGCAAAACAACGGATGACGGCAAACTGAAAGTGACCATCCATAACACGTTATTCGAAAATATCTCGGCACGCGCACCCCGCGTCCGCTTTGGCCAAGTGCATCTTTACAATAACTACCACGTGGGCAGTACCAGTCACAAAGTGTACCCATTCAGTTATGCCCACGGCGTGGGCAAAAGTTCGAAGATCTTTTCTGAACGTAATGCGTTTGATATAAGCGGTATCAGCGGTTGCAGCAAGGTTGCAGGGGATTACGGCGGCAGCGTTTACCGTGACAGCGGTTCGCTGGTCAACGGCACGGCGATTACCTGCACCTGGAGCACCAGCATTGGCTGGACGCCGCCCTACAGCTACACGCCGCTGGCAGCCGACAAAGTGGCGGCCGATGTCAAGGCCAAGGCCGGTGCAGGTAAAATCTGA
Protein sequence:
VRGADTGRLDIPGKTTIVGTTSTAEIREGFFYAKENDVIIRNLTIENPWDPEPVWDPTDGSSGNWNSEYDGLTVEGASNVWVDHVTFTDGRRTDDQNGTANGRPKQHHDGALDVKNGANYVTISYSIFRNHEKNNLIGSSDSKTTDDGKLKVTIHNTLFENISARAPRVRFGQVHLYNNYHVGSTSHKVYPFSYAHGVGKSSKIFSERNAFDISGISGCSKVAGDYGGSVYRDSGSLVNGTAITCTWSTSIGWTPPYSYTPLAADKVAADVKAKAGAGKI
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
30330.3 280 6.53 -0.554 18.29
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.