Effector profile
PlantPEAD ID: PlantPEAD35538 Uniprot ID: C5ALM1 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 337 Pathogen type: Bacteria
Species: Burkholderia glumae Strain: strain BGR1 Other name: Pseudomonas glumae
Gene name: NCBI Gene ID: CP001504
Entry name: C5ALM1_BURGB Protein name: Type III effector HrpK1
DOI:
Gene/Protein information
Gene sequence:
CTGCGGGTTTCCTTTTTCGAATTCTTCTCTTCCGTTCCCATGACCTCGCTCTCAACGCTCCCGTTTTCTCCGCCCGTCGCCGCCCCGTCGATGACGGGCGTGGCAGATCCGTCGAGCAGCCTGCAGGCCGGCATGCAGCAGCTCGAACAGATCGACTCGCAACTGCAGCAGATGGTGCGCGCCCTGATGTCGTCCGCGCAGCAACAGGAGGCCGGCGGCAATTCGGGCAGCAGCGACGCGACGCCGTCGAGCAGCCTGGCGATGCCGCAGACCGCCGCCGCCACGCTGCCGCAGGAGGGCGCGACGGGCGCGGGCGCGGGGGCCGCGAGCGGCGCGGCGACCGACGACGGCAAGTACGCGGCGCTCGACAGCTACAGCCAGGCCAACGACCAGTCCGATCTCGCGAAGTGGGCCGATCTCGCGCCGCCCGACCAGGGCGCCTCGCTCGAGCGTCCGCTCGCGGCGATGCAGATCCTGAGCGGCAAGGCCGGTCCCGACGGGCAGCCGCCCAGCGACGCGCAGAAGGCCGCCGCGATGCAGTTCGTCAACGACAACCCGTCGCTGAAGACGGCGCTGCAGAACACCGGCGCGCTGAAGTCCGACGGCACCATCGACACGAAGAAGATGAACGCGTTCATGGGCCAGGTCAGCACCAATCTCGATCAGGCCGATTCGGACATCAAGGACTACATGAAGAAGCATCCCGACGCGGATGCCGATTCGGTGAACGTCGAGCGTTCGGCGGGGCTGCTCAAGGCCTACAACGCGATCGCGGGCGAGTCCGAGGGCCACAAGTCGAACGGCAAGAACGGCCACAACTACACGCACGGCGGCAAGAGCGGCGGCGGCCTGACCACCCAGAAGCAGATCGAGGATCTGCAGAAGGACGCGGGCTTCAGCGCGTCGCTGAAGGCGGCCGCGCAGGCGTTCGGCTCCGACGGCGGGTTCGACGACCTGGATCGCAGCGGCGACGACAAGGCCACCAGCAAGCGCGACCAGGTCTACTCGACCAAGAACCTCGACCACTTCCTCCACGACGACGCGCCGACCACCCAGGCCGGCTCGCAGCAGTTCCTGCAGGACGCCAGCCTGCAGAACATCACCGGCAACACCGACATCAGCCAGCTCAACGGCGACGTGATCCAGAACCCGCAGAACTACACGCCGCAGCAGAAGGCGGCGGTGATGGTGAAGCTGATGGAGACCCTGGTGGACGTGCAGGCCGGCGGCTCGGACAAGCTGCGCAACGTCGACAAGACGGTGGCCGCGCTCCAGCAGGACATCCAGAAGCTCGCGAGCGACCCGGACACGGCCGCCTACCTGCAGCAGACGGTGCCGCCCGAGATGCAGCAGATGTCGGGCGAATTCCAGCAGGCGGGCGGCGTCGGCACGGCCGGCAGCGGCGCCGCCGACGGCACGGGCGGCACCACGGCCGCGGGCGGCAGCGGCCAGTCGGCCGGCCAGACCCTCGACGACGTGCACCGCGGGCTCAGCGACGCGAAGACGGTCACCGATACGCTGAGCGACCTCGCCAAGGGTGACGGCTTCATGGGCCTGGGCGGCGACAGCGCGGCGGCCGAGGCGGCCGGCGCGGCGGCGGCATCGGGCGGCGCGGAAGGCGCGGCCGAGGGCGCGGCGGTGGGTGCCGAGGCGGCCGAAGGCGCGGCGGCCGGCGTCGAGGGCGGCGCGGCGGCGGCCGAGGGCGTGGCCGGCGCGGTCGGCGGCGCGCTCGCGGCGGCCGCGCCGGTGATGGCGGTGGGCGCGGCCGTGGTCGGCGTGGCCGGCATCGTGTTCGCGATCGTCGAGGCCGTGAAGAAGCACAACGACCAGAAGAAGTTCGCCTCGAACGTGAACCCGACGCTGCAACAGTTCGGTATTCCGCTGCCGTCCTGA
Protein sequence:
MRVSFFEFFSSVPMTSLSTLPFSPPVAAPSMTGVADPSSSLQAGMQQLEQIDSQLQQMVRALMSSAQQQEAGGNSGSSDATPSSSLAMPQTAAATLPQEGATGAGAGAASGAATDDGKYAALDSYSQANDQSDLAKWADLAPPDQGASLERPLAAMQILSGKAGPDGQPPSDAQKAAAMQFVNDNPSLKTALQNTGALKSDGTIDTKKMNAFMGQVSTNLDQADSDIKDYMKKHPDADADSVNVERSAGLLKAYNAIAGESEGHKSNGKNGHNYTHGGKSGGGLTTQKQIEDLQKDAGFSASLKAAAQAFGSDGGFDDLDRSGDDKATSKRDQVYSTKNLDHFLHDDAPTTQAGSQQFLQDASLQNITGNTDISQLNGDVIQNPQNYTPQQKAAVMVKLMETLVDVQAGGSDKLRNVDKTVAALQQDIQKLASDPDTAAYLQQTVPPEMQQMSGEFQQAGGVGTAGSGAADGTGGTTAAGGSGQSAGQTLDDVHRGLSDAKTVTDTLSDLAKGDGFMGLGGDSAAAEAAGAAAASGGAEGAAEGAAVGAEAAEGAAAGVEGGAAAAEGVAGAVGGALAAAAPVMAVGAAVVGVAGIVFAIVEAVKKHNDQKKFASNVNPTLQQFGIPLPS
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
63362.4 630 4.47 -0.335 33.97
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.