Effector profile
| PlantPEAD ID: PlantPEAD35548 | Uniprot ID: G4TWR8 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 65672 | Pathogen type: Fungi |
| Species: Serendipita indica | Strain: strain DSM 11827 | Other name: Root endophyte fungus，Piriformospora indica |
| Gene name: | NCBI Gene ID: CAFZ01000515 | |
| Entry name: G4TWR8_SERID | Protein name: Pectate lyase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGATCTCAGTATTCGCACTCGTTACGATACTCGCTCCTTTGCTTGCCCAAGCTGCTGTGGTTAAAAGACATGTAGAGCGTTATTTTATCTACCATGTGTATCTGACCAAGCGTAGGTGTGTCTGGTGCGACGTGCGTGTACTCGAACGAGTGGTACTCTCAATGTATGCGGGTCTCCCCGGTGCCGCGACATCGACAAAGACGACGTCAACGACAAGGGGAAGTACATCCACGCCCACTACACCAATGACACCCACGGGTATCACTACAAAGCTACCACCGTCCTCTGGCTACGTTGCATTGCCGACCACGTCTGTCATTTCCGGATCGTTTGACGGAGGAATGAAGCGATATGACCGTGCAGGCTCATCTGGAGGATGCCAAGGACAGACAGAGACGGGCGAATCGGACGCCGTGTTCAGTCTCCAGCCAGGTGCGACCATTTCGAACGTGATCATTGGCGCAAATCAAGCCGAAGGCATCCACTGCCAAGGAACATGTCGACTTGTTAATATTTGGTGGCAAGACGTGTGCGAGGACGCAGCAACGTTTAAGCAAACTGGGTCGGGAGACGTCTCCTACGTTATTGGCGGCGGTGCCTTCCACGCAAGTGACAAGATTTTCCAACACAACGGAGCCGGAACAGTCTCCATTTCAAACTTTTACGCTTCCGACTTTGGCAAGCTATATCGTGCATGCGGAAACTGTGCGCAGTCCTACCGACGTAACGTCATTGTTAACAATGCAAGGCTCGAGAGTGGGTCTAGTGGCGTTGGGATAAATACAAACTTCGGAGACACGGCCAGATTCACTAATGTCTGCTCAACTGGAAAGCCATCTGTCGCAAGCACGACACCAGGAAATGAGCCAACAAAAATTGGATGGTACGTCGCCAACCTTATGACGACCACTCCTGACTAG
Protein sequence:
MISVFALVTILAPLLAQAAVVKRHVERYFIYHVYLTKRRCVWCDVRVLERVVLSMYAGLPGAATSTKTTSTTRGSTSTPTTPMTPTGITTKLPPSSGYVALPTTSVISGSFDGGMKRYDRAGSSGGCQGQTETGESDAVFSLQPGATISNVIIGANQAEGIHCQGTCRLVNIWWQDVCEDAATFKQTGSGDVSYVIGGGAFHASDKIFQHNGAGTVSISNFYASDFGKLYRACGNCAQSYRRNVIVNNARLESGSSGVGINTNFGDTARFTNVCSTGKPSVASTTPGNEPTKIGWYVANLMTTTPD
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 32391.5 | 306 | 8.84 | -0.081 | 28.44 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR004898,IPR012334,IPR011050
Pfam: PF03211
SMART:
KEGG:
PRINTS: