Effector profile
| PlantPEAD ID: PlantPEAD35558 | Uniprot ID: A0A3M4W1Q8 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 36746 | Pathogen type: Bacteria |
| Species: Pseudomonas cichorii | Strain: ICMP 6917 | Other name: |
| Gene name: | NCBI Gene ID: RBRY01000076 | |
| Entry name: A0A3M4W1Q8_PSECI | Protein name: Pectate lyase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCAGACCTCCTTGTGGTTGGTAGAACCCGGCAGCTTGTCGTAAGGGTGCTCTACGTTCTTCAGGTTGATGCCGCTGGTGGTCAGGTTCAGGCCTTCACTGTCGCTCTTCACGAAGGAGAACTTGCCGTTTTCAGCGTCGACGTTCTTCAGGTCCAGGTTCCAGTTGCCTTGCTGCCCACCGTTGGTGCGCATGAAAGTACCGAAGTCCTTGGCCTTGAAGTTGTCCACACTCACGTTAGCGTCGGCATTGAGCTGGAAGATCTTGTCATTGGCGCCCTGAGCACTGCTGTTGGTGATGTTCAGGTTAGTGACTTTGGCACCGCCTTCACCCTTCACGGTCAGTGCATCTTCACCGACGTTGGTCCAGTGAACGTTATCGACGTTTACAGCCTTCTCGTTGCCAGCACGAACGTGCACGCCATCAGCGGCGTTTTCACCGAAGGTCACGTTTTTCAGGGTGGCGCCTTCAGCCAGTTCAAACATTGGCTTCTGTCCTTCGCCCTGTCCGCCATCACCCAGGCTAGGGCCGGCAGTAAAGGTCTTGCCCTGGCCATCGAACAC
Protein sequence:
MFDGQGKTFTAGPSLGDGGQGEGQKPMFELAEGATLKNVTFGENAADGVHVRAGNEKAVNVDNVHWTNVGEDALTVKGEGGAKVTNLNITNSSAQGANDKIFQLNADANVSVDNFKAKDFGTFMRTNGGQQGNWNLDLKNVDAENGKFSFVKSDSEGLNLTTSGINLKNVEHPYDKLPGSTNHKEV
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 19689.5 | 186 | 5.05 | -0.639 | 1.58 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR004898,IPR012334,IPR011050
Pfam: PF03211
SMART:
KEGG:
PRINTS: