Effector profile
PlantPEAD ID: PlantPEAD35559 Uniprot ID: B3IXG1 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 36746 Pathogen type: Bacteria
Species: Pseudomonas cichorii Strain: SPC9018 Other name:
Gene name: HrpW NCBI Gene ID: AB433910
Entry name: B3IXG1_PSECI Protein name: pectate lyase
DOI:
Gene/Protein information
Gene sequence:
TCAGACCTCCTTGTGGTTGGTAGAGCCCGGCAGCTTGTCGTAAGGGTGCTCTACGTTCTTCAGGTTGATGCCGCTGGTGGTCAGGTTCAGGCCTTCACTGTCGCTCTTCACGAAGGAGAACTTGCCGTTTTCAGCGTCGACGACGTTCTTCAGGTCCAGGTTCCAGTTGCCTTGCTGCCCACCGTTGGTGCGCATGAAAGTACCGAAGTCCTTGGCCTTGAAGTTATCCACGGTCACGTTAGCGTCGGCATTGAGCTGGAAGATCTTGTCATTGGCGCCTTGGGCACTGCTGTTGGTGATGTTCAGGTTGGTGACTTTGGCACCGCCCTCACCCTTCACGGTCAGCGCGTCTTCACCGACGTTGGTCCAGTGAACGTTATCGACGTTTACAGCCTTCTCGTTGCCGGCACGAACATGCACGCCATCAGCGGCGTTGTCACCGAAGGTCACGTTTTTCAAGGTGGCGCCTTCAGCCAGTTCAAACATTGGCTTCTGTCCTTCGCCCTGTCCGCCATCACCCAGGCTAGGGCCGGCAGTGAAGGTCTTGCCCTGGCCATCGAACACTTCGCCCGGACCTACCTTGATCGTTTCATTGACTACGGTCGGGCTGCCCGAAGCAGTCGGGAAGGACACTGGAGTCGATGAACCAGCAGCGCCAGTGCCTGCAGGGCTACCTGTGCCAGGAGTCGGGGTCGGAGTCGTGCCACCGATGGATGGAGTGCTACCACCACCGCCGCCACCAACAGACGGAGTACCGCCGCCACCACCGCCACCAACAGATGGAGCTGGAGCACCACCGCCACCGCCACCGCCACCAACAGACGGAGCTGGAGAACCACCGCCACCGCCGCCAGCAACAGCCGGAGCACCACCGCCACCGCCACCGCCAACAGACGGAGCAGGAGAACCACCGCCGCCACCGCCGCCACCACCGGTCCCCTTGCTGGAGGAGTCAGACGGCTGGTTGAAGGTTTCCGGGTGGCTGTCCATGAACTGGGCGATCATTTCCAGCAGCTCTTTGAGCTTGCCGTCCTGGGATACCTGGCCACCGCCATCGGATGTCGGCTGGATGGAGTTATCCAGAGAACCGCCACCCAGGCTTTTCATCAAGGTGTTGACCAGGTCTTCAACACTGCTGGAACCACCCGATGCGCCTTGAGCACCGCCCAGACCCTGGTTTGAACCAAGACCTTCAAGGCCTTTGGTGCCACCACCGCCAGTGCCGCCTGCACCGCTTACTGGCGAACCGGAGCCGGAACCCGACCCATTACCGCCGCCTTCACCAGTGCCCGACGAAGAGTCGGAGCCGCCAAGAATTTTTTCGAACAGGGCCATCAGAACCTGAGTCAGCAGCTCTTTGGACGATTTGTCACCAGTGCCGTTAGCACCCTTGGAACTGCCATCCTTTTGTTCGCCGCCCTGCAGCAAGGAGTCGATGTCGCTTTGGCCCGACTTGCCAGCCTGGCCCGCACCGGAACCCGAACCTGCGCCGGCACCAGCACCACCGGAGCCAGAACCGGAACCGAGCAACATTTCAGCCAGCATGCCGGCCAGTTGCTCCAGAGGGGATTGTCCGCCCTGCCCCGTGGCAGCGCCCGGTGCTGCGCCCCCCAGACCACCGGATAAGCCCGAAAGACCGGAAAGACCGTTTTGGGAAAAACCCGAAATACCCGCGATATCAGACAT
Protein sequence:
MSDIAGISGFSQNGLSGLSGLSGGLGGAAPGAATGQGGQSPLEQLAGMLAEMLLGSGSGSGGAGAGAGSGSGAGQAGKSGQSDIDSLLQGGEQKDGSSKGANGTGDKSSKELLTQVLMALFEKILGGSDSSSGTGEGGGNGSGSGSGSPVSGAGGTGGGGTKGLEGLGSNQGLGGAQGASGGSSSVEDLVNTLMKSLGGGSLDNSIQPTSDGGGQVSQDGKLKELLEMIAQFMDSHPETFNQPSDSSSKGTGGGGGGGGGSPAPSVGGGGGGGAPAVAGGGGGGSPAPSVGGGGGGGGAPAPSVGGGGGGGTPSVGGGGGGSTPSIGGTTPTPTPGTGSPAGTGAAGSSTPVSFPTASGSPTVVNETIKVGPGEVFDGQGKTFTAGPSLGDGGQGEGQKPMFELAEGATLKNVTFGDNAADGVHVRAGNEKAVNVDNVHWTNVGEDALTVKGEGGAKVTNLNITNSSAQGANDKIFQLNADANVTVDNFKAKDFGTFMRTNGGQQGNWNLDLKNVVDAENGKFSFVKSDSEGLNLTTSGINLKNVEHPYDKLPGSTNHKEV
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
52729.8 561 4.61 -0.369 32.98
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.