Effector profile
PlantPEAD ID: PlantPEAD35578 Uniprot ID: H6SWR0 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 51029 Pathogen type: Nematoda
Species: Heterodera glycines Strain: Other name: Soybean cyst nematode worm
Gene name: Pel-3 NCBI Gene ID: HQ123255
Entry name: H6SWR0_HETGL Protein name: Probable pectate lyase F
DOI:
Gene/Protein information
Gene sequence:
TTAATAAATTGAATAAAAATTAATTCATCAATGCATTCCTTTCTTGTACTGACCATTCTTTTTGCCAATTTGGCAACAAATGCTTTTGGGCAACAATGGCCAAAAGCGACTAGTGAAGAAACTGTTAAGGCAACAATTAAAGTGTCAGGAGGCGTCAAAGATTTTGGCTTCAAACGGTTGACCGCCTCTTCGGCATTGGGCACCGGTGATCAGTCGGAGGGCCAAAAAGCACTGATCCGTGCCGAAAAGAATGCAGTGATCAAAAATTTGATCATTGACCAAAACGGGGCGGACGGCATTCATTGCTATGACGGGTGCACCCTGCAAAATGTGTGGTGGGAAAAGGTTGGCGAAGACGCGGCCACTTTCCGGAGCAGCAGCGGGTGCAAGGAGTTCAGTTTCACGGTCACGGGCGGCGGTGTGAAAAATGCCAAGGACAAAGTGTTCCAAATGAACGGCGGTGGCACGTTGACGATCAAAGATTTTGTGGCCGAAAGCATTGGCAAATTGGCGCGCTCATGCGGCAACTGCAAAACGCAATGCCAAAAACGCAAGTTTGTGCTGGAGAACATTAAAGTGACTGGACTGAAAACGCTGTTGTGTGGCCTCAACGAGAATTATGGCGATGTGGCAACCATCAAAAATGTGCAAATCACCGGGTCGAAGAAAGTGTGTGCCGAATTCCAAGGCAACGACCAGCAAAAGGAGCCGCCAATGTTGCGCAGTTTCGACATCGGATCGAAAGGCGATGGCAAAAATTGCATCATTTCGGGCACCACCAGCGGCTGATCAGAAGAATGATCAAACAGTGTTAAAATGAGAAGGGAATTCTTGTATGAAGAATTAATATAATAATGGAAATAGTTTAATTACCTTTTAATGTGTTGACGCAGTTCGGAAATAAATTGATAATTGAAAAAAAAAAA
Protein sequence:
MHSFLVLTILFANLATNAFGQQWPKATSEETVKATIKVSGGVKDFGFKRLTASSALGTGDQSEGQKALIRAEKNAVIKNLIIDQNGADGIHCYDGCTLQNVWWEKVGEDAATFRSSSGCKEFSFTVTGGGVKNAKDKVFQMNGGGTLTIKDFVAESIGKLARSCGNCKTQCQKRKFVLENIKVTGLKTLLCGLNENYGDVATIKNVQITGSKKVCAEFQGNDQQKEPPMLRSFDIGSKGDGKNCIISGTTSG
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
26981.8 252 9 -0.279 27.67
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.