Effector profile
PlantPEAD ID: PlantPEAD35581 Uniprot ID: H6SWR3 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 51029 Pathogen type: Nematoda
Species: Heterodera glycines Strain: Other name: Soybean cyst nematode worm
Gene name: Pel-6 NCBI Gene ID: HQ123258
Entry name: H6SWR3_HETGL Protein name: Probable pectate lyase F
DOI:
Gene/Protein information
Gene sequence:
ACACTAAAATAACATCAATTAATAAATTGAATAAAAATTAATTAATCAATGCATTCCTTTCTTGTACTGACCATTCTTTTTGCCAATTTGGCAACAAATGCTTTTGGGCAACAATGGCCAAAGGCAACTAGTGAAGAAACTGTTGATGCAACAATCAAAGTTTCGGGAGGCGTCAAAGACTTTGGCTTCAAACGGTTGACCGCCTCTTCGGCATTGGGTAGCGGTGATCAGTCGGAGGGCCAAAAAGCATTGATCCGTGCCGAAAAGAACGCAGTGATCAAAAATTTGATCATTGGCCAAAACGGGGCGGACGGTATTCATTGCTATGACGGGTGCACTCTGCAAAATGTGTGGTGGGAGAAGGTTGGAGAAGACGCGGCCACTTTCCGGAGCAGCAGCGGGTGCAAGGAGTACAGTTTCACGGTCACAGGCGGCGGTGTGAAAAATGCCAAGGACAAAGTGTTCCAAATGAACGGCGGTGGCACTTTGACGATCAAAAATTTTGTGGCGGAAGGCATTGGCAAATTGGCGCGCGCATGCGGCAACTGCAAAACGCAATGCCAAAAACGAAAGTTTGTGCTGGAGAACATTAAAGTGACTGGGCTGAAAACGCTGTTGTGTGGCCTCAACGAGAATTATGGTGATGTGGCAACCATCAAAAATGTGCAAATCACCGGGTCGAAGAAAGTGTGTGCCGAATTCCAAGGCAACAACCAGCAAAAGGAGCCGCCAATGTTGCGCAGTTTCGACGTCGGATCGAAAGGCGATGGCAAAAATTGCATCATTTCGGGCACCACCAGCGGCTGAACAGAAGAATGATCAAAGAAGTGTTAAAATGGGAAAGCAATTATTTAACCGAAGAATTAATAAATATAAACCTTGAAAAATGTCACAAAAAAAAAAA
Protein sequence:
MHSFLVLTILFANLATNAFGQQWPKATSEETVDATIKVSGGVKDFGFKRLTASSALGSGDQSEGQKALIRAEKNAVIKNLIIGQNGADGIHCYDGCTLQNVWWEKVGEDAATFRSSSGCKEYSFTVTGGGVKNAKDKVFQMNGGGTLTIKNFVAEGIGKLARACGNCKTQCQKRKFVLENIKVTGLKTLLCGLNENYGDVATIKNVQITGSKKVCAEFQGNNQQKEPPMLRSFDVGSKGDGKNCIISGTTSG
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
26850.6 252 9.09 -0.271 24.54
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.