Effector profile
PlantPEAD ID: PlantPEAD35585 Uniprot ID: A3F5C0 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 97005 Pathogen type: Nematoda
Species: Heterodera schachtii Strain: Other name: Sugarbeet cyst nematode, Tylenchus schachtii
Gene name: Pel1 NCBI Gene ID: EF203899
Entry name: A3F5C0_HETSC Protein name: pectate lyase
DOI:
Gene/Protein information
Gene sequence:
ATGATGAAACTTTTCATTTTGTTGGTCATCAATTTTGTCCAAACTGGTCAACTGAATGCTGGCATATGCAAATTTCCAACTCCGTCAAAAAGTGTTACGGTGCAATCGATGATGACTGTTTCAACGAGTGCGGACTACAAGAACACTTTGTTTGTCGGCGGTTCCGGCATTTTGAACGGCGCATGTGATGTGAAAAATGGCAAACTGAAATATTTGATGACATTGAAGAATGGCGTGACCATCAAAAATGCCATTCTTGACACGCCCGGTTTGGGCATTTACTGCGAGGGCAATTGTGTGCTGGAAAATATTTACTACAAGCGACTGTGTTACCATGCTACTGGGTTCGGATATAAGAGCACAAGCACTTCGTACACCTACCAAGTGATTGGCGGTGCTGGCCAAGGTTCACCGGACAAATATTTCACCCAATCGGGCAAAGGCACAACCATCATCAAGAATTTCTGCGCTGAAGGCAAATACGGCAAATTGTGGTGTTCATGCGGAAATTGTCCGTTCCAAACGGCGCGTACCGTACAAATTTCCAACACCGTCCTTAAGGGGCCCGGACTTTCGGTTGTCTCGCTTAATTCCAACTACGGTGACAAAATGTCAATTTCGGGACTGACTTTGCAGGGCCAAAAATCATCGAGCACAAAAACTAAATACATTTGCCAAGAGTACAAAGGCCTCACTTACATGTCCGCCATGAGTCCTCAATCGAATTATGAGCCAACCAAATCGGGCAGTGGCACATGCTCATACAGTGCATCGGCAGTTAAAATCACCAGCTAA
Protein sequence:
MMKLFILLVINFVQTGQLNAGICKFPTPSKSVTVQSMMTVSTSADYKNTLFVGGSGILNGACDVKNGKLKYLMTLKNGVTIKNAILDTPGLGIYCEGNCVLENIYYKRLCYHATGFGYKSTSTSYTYQVIGGAGQGSPDKYFTQSGKGTTIIKNFCAEGKYGKLWCSCGNCPFQTARTVQISNTVLKGPGLSVVSLNSNYGDKMSISGLTLQGQKSSSTKTKYICQEYKGLTYMSAMSPQSNYEPTKSGSGTCSYSASAVKITS
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
28294.6 264 9.34 -0.128 26.92
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.