Effector profile
| PlantPEAD ID: PlantPEAD35598 | Uniprot ID: A0A1I7SJJ0 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 6326 | Pathogen type: Nematoda |
| Species: Bursaphelenchus xylophilus | Strain: Ka4C1 | Other name: Bursaphelenchus xylophilus |
| Gene name: | NCBI Gene ID: CAJFDI010000003 | |
| Entry name: A0A1I7SJJ0_BURXY | Protein name: Probable pectate lyase F | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGAAGTCTATTTCGCTCGGTGTACTCTTCCTCGCGGCATACGTTTCGGCCCAGTTCGGCACACGGCCCAATCCGAAGTCCACGCAAAAGGTGCCCAAGACGATCGAAGTCAAAGCCGGCGCTGTCTTCGATGGCAAAATGGAGCGCTACGTCTCCGGCTTCGCCGATGGTGGCATTGAAGAAGCACAACCACCAATCTTCCTGCTGGGTGACGGTGCCACCATCCAAAATATAGTCTTTGTATCCCCAGTGTCTGATGGCATCCACTGCAACGGCAGCTGCAAGATCGAGAATGTCTGTGTGACTGGAGGAGGTGCGAAAAAAGCTCATAACAAAGTCTTCCAGCACAATGGAGGAGGCACCTTGACCATCAAGAACTTCTTGGGAGAAGACATGGGAAAGCTCTACCGTTCTTGCGGCAACTGCAATATCAATGGCAAGTACGACCGTCATGTCATCATTGACACTGTTAAAGTTACTGGACCCGCTCTCACCTTGGCCGCAGTCAATGGTAATTATGGGGACACCGCGGTGTTTAAGAATGTACAAATATCCGGATCTGTAACCTCAATCTGCCAAGACACCCACGGCGTAAACGATGAGACCCTTCCAAAGGACAAGACGGAATATGTTACTGAGAAAGACGACGACCAAAAGGTTTGCAACTACAAGAAATCGGATATCAAGAAGATCTGA
Protein sequence:
MKSISLGVLFLAAYVSAQFGTRPNPKSTQKVPKTIEVKAGAVFDGKMERYVSGFADGGIEEAQPPIFLLGDGATIQNIVFVSPVSDGIHCNGSCKIENVCVTGGGAKKAHNKVFQHNGGGTLTIKNFLGEDMGKLYRSCGNCNINGKYDRHVIIDTVKVTGPALTLAAVNGNYGDTAVFKNVQISGSVTSICQDTHGVNDETLPKDKTEYVTEKDDDQKVCNYKKSDIKKI
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 24725.1 | 231 | 8.38 | -0.27 | 25.18 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR004898,IPR012334,IPR011050
Pfam: PF03211
SMART:
KEGG:
PRINTS: