Effector profile
| PlantPEAD ID: PlantPEAD35612 | Uniprot ID: Q33CQ0 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 6325 | Pathogen type: Nematoda |
| Species: Bursaphelenchus mucronatus | Strain: | Other name: Pinewood nematode worm |
| Gene name: BmPel2 | NCBI Gene ID: AB232912 | |
| Entry name: Q33CQ0_BURMU | Protein name: Probable pectate lyase F | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGGCCCTGTTCTCCCTTACGGTTCTGGCATTTACAGCAATTGTAGCGGTTGATGCCGCTACTTGGCCCAATCCTTCTGGCTCGACTAAAGTCCCTAAGAAGATGGTCATTAAAGCCGGGGAAGTTTTCGATGGAAAGAATCAACGATATGTCAGCGGCTGGGGTGGTGGTGACCAAGAAGAAGGACAAGACCCCATCTTCGAATTACAAGCAGGAGCTTCTATCAAAAACGTTGTGATTGGCGCTCCGGCAGCCGATGGTATCCACTGYTTGGGAGGTTGTGACATCACAAATGTCTATTGGGAAGATGTTGGAGAAGATGCCGCCACTTTCAAAGGCAAAGCTTCAGACAAGTACAATATCATTGGTGGAGGAGCCAAGGAAGCTGATGACAAGGTCTTCCAACACAATGGAGGTGGCACTGTTACCATCAAGAACTTTGATGCCCAAAACATCGGAAAACTCTACCGTTCTTGCGGCAATTGCGTTAACAACGGAATGGATCGTCACGTCGTTATGGATGGTGTCACCGTTTCTGGAAAAATGTTAGTTCTGGCGGGTGTCAACGGCAACTACGGCGACACAGCGACCCTAACAAATGTGAAAGTCCCAAGCGGCGGCGTTGCTTGCGAGAATTTCCTGGGAGTCAACGACAACAAGGTTGAGCCAAAAGGAGTAGCCTCCTACAAGGAAGGACAAGATGGCGATGGCAAAGTTTGCATCTACARGAAGACCGATGTTACTGCTGTTTAG
Protein sequence:
MALFSLTVLAFTAIVAVDAATWPNPSGSTKVPKKMVIKAGEVFDGKNQRYVSGWGGGDQEEGQDPIFELQAGASIKNVVIGAPAADGIHCLGGCDITNVYWEDVGEDAATFKGKASDKYNIIGGGAKEADDKVFQHNGGGTVTIKNFDAQNIGKLYRSCGNCVNNGMDRHVVMDGVTVSGKMLVLAGVNGNYGDTATLTNVKVPSGGVACENFLGVNDNKVEPKGVASYKEGQDGDGKVCIYXKTDVTAV
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 26059.5 | 250 | 5.11 | -0.159 | 22.01 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR004898,IPR012334,IPR011050
Pfam: PF03211
SMART:
KEGG:
PRINTS: