Effector profile
PlantPEAD ID: PlantPEAD35656 Uniprot ID: C8CMI9 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 36090 Pathogen type: Nematoda
Species: Globodera pallida Strain: Chavornay Other name: Potato cyst nematode
Gene name: Pel2 NCBI Gene ID: GQ426893
Entry name: C8CMI9_GLOPA Protein name: Probable pectate lyase F
DOI:
Gene/Protein information
Gene sequence:
TTCGTTCTTTGCTTCTTTTTTGCCAATTTAACTCCGATATTTGCAAATTGGCCCACCGCGACGGGCGACGAGACTGTCTCTGAGACAATAATAATTGTCGGCGGGATCAAAGACTACAAATTCAAACGTTTGACCGCTTCATTAACGTTGGGCACAGGCGACCAACGTGAGGGCCAAAAAGCGATCATTCGTGCCGAAAAGGGGGCGGTGATCAAAAATTTGATCATCGGCGAAAACGGTGCCGACGGCATTTATTGTTACGACAGTTGTACTTTGGAGAATGTTTGGTTCGAGAAGGTTGGAGAAGAAGGGGCAACGTTTCGGACCAGCAATGACTGTGGCGCCGGATCATTTGTCGTCACGGGTGGTGGCGCTCGAAATGCTTACGACAAAGTGTTTCAACTGAACGGTGGCGGACAATTGACAATTAGAAATTTTGTGTGCCAAAACATTGGCAAATTGGCGCGCTCGTGCGGCAATTGCAAAGTGCAATGCAAAAACAGAAAATTTGTCGTCGAAAATGTGAAAGTGACGGGACTGAAAACGCTGCTCGTCGGACTGAACGAAAACTACGGCGACGTGGCGTCTATCAAAAATGTGCAAATCAATGGGAAAACGGGCGCCGTTTGTTGCGAGTTCACCGGCAACAACCAGCAACAGGAGCCAAAATTGTTGCGCAGCTATGGCGTCGGCTCAGCGGGTGACGCCAAAAACTGCATCATTTCAGGCGCCAAAAGCGGCTGA
Protein sequence:
FVLCFFFANLTPIFANWPTATGDETVSETIIIVGGIKDYKFKRLTASLTLGTGDQREGQKAIIRAEKGAVIKNLIIGENGADGIYCYDSCTLENVWFEKVGEEGATFRTSNDCGAGSFVVTGGGARNAYDKVFQLNGGGQLTIRNFVCQNIGKLARSCGNCKVQCKNRKFVVENVKVTGLKTLLVGLNENYGDVASIKNVQINGKTGAVCCEFTGNNQQQEPKLLRSYGVGSAGDAKNCIISGAKSG
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
26383 247 8.72 -0.111 13.49
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.