Effector profile
PlantPEAD ID: PlantPEAD35659 Uniprot ID: C8CMJ5 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 36090 Pathogen type: Nematoda
Species: Globodera pallida Strain: Colque cachi Other name: Potato cyst nematode
Gene name: Pel2 NCBI Gene ID: GQ426899
Entry name: C8CMJ5_GLOPA Protein name: Probable pectate lyase F
DOI:
Gene/Protein information
Gene sequence:
TTCGTTCTTTGCTTCTTTTTTTCCAATTTAACTCCGATATTTGCAAATTGGCCCACTGCGACGGGCGACGAGACTGTCTCTGAGACAATAATAATTGTCGGCGGGATCAAAGACTACAAATTCAAACGTTTGACCGCTTCATTAACGTTGGGCACAGGCGACCAACGTGAGGGCCAAAAAGCGATCATTCGTGCCGAAAAGGGGGCGGTGATCAAAAATTTGATCATCGGCGAAAACGGTGCCGACGGCATTTATTGTTACGACAGTTGTACCTTGGAGAATGTTTGGTTCGAGAACGTTGGAGAAGAAGGGGCAACGTTTCGGACCAGCAATGACTGTGGCGCCGGATCATTTGTCGTCACGGGTGGTGGCGCTCGAAATGCTTACGACAAAGTGTTTCAACTGAACGGTGGCGGACAGTTGACAATTAGAAATTTTGTGTGCCAAAACATTGGCAAATTGGCGCGCTCGTGCGGCAATTGCAAAGTGCAATGCAAAAACAGAAAGTTTGTCGTCGAAAATGTGAAAGTGACGGGACTGAAAACGCTGCTCATCGGACTGAACGAAAACTACGGCGACGTGGCGACCATCAAAAATGTGCAAATCAATGGGAAAACGGGCGCCGTTTGTTGCGAGTTCACCGGCAACAACCAGCAACAGGAGCCAAAATTGTTGCGCAGCTATGGCGTCGGCTCAGCGGGTGACGCCAAAAACTGCATCATTTCAGGCGCCAAAAGCGGCTGA
Protein sequence:
FVLCFFFSNLTPIFANWPTATGDETVSETIIIVGGIKDYKFKRLTASLTLGTGDQREGQKAIIRAEKGAVIKNLIIGENGADGIYCYDSCTLENVWFENVGEEGATFRTSNDCGAGSFVVTGGGARNAYDKVFQLNGGGQLTIRNFVCQNIGKLARSCGNCKVQCKNRKFVVENVKVTGLKTLLIGLNENYGDVATIKNVQINGKTGAVCCEFTGNNQQQEPKLLRSYGVGSAGDAKNCIISGAKSG
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
26413 247 8.6 -0.118 14.18
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.