Effector profile
PlantPEAD ID: PlantPEAD35669 Uniprot ID: C8CML1 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 36090 Pathogen type: Nematoda
Species: Globodera pallida Strain: Chocon Other name: Potato cyst nematode
Gene name: Pel2 NCBI Gene ID: GQ426915
Entry name: C8CML1_GLOPA Protein name: Probable pectate lyase F
DOI:
Gene/Protein information
Gene sequence:
TTCGTTCTTTGCTTCTTTTTTTCCAATTTAACTCCGATATTTGCAAATTGGCCCACCGCGACGGGCGACGAGACTGTCTCTGAGACAATAATAATTGTCGGCGGGATCAAAGACTACAAATTCAAACGTTTGACCGCTTCATTAACGTTGGGCACAGGCGACCAACGTGAGGGCCAAAAAGCGATCATTCGTGCCGAAAAGGGGGCGGTGATCAAAAATTTAATCATCGGCGAAAACGGTGCCGACGGCATTTATTGTTACGACAGTTGTACTTTGGAGAATGTTTGGTTCGAGAACGTTGGAGAAGAAGGGGCAACGTTTCGGACCAGCAATGACTGTGGTGCCGGATCATTTGTCGTCACGCGTGGTGGCGCTCGAAATGCTTACGACAAAGTGTTTCAGCTGAACGGTGGCAGACAATTGACAATTAGAAATTTTGTGTGCCAAAACATTGGCAAATTGGCGCGCTCGTGCGGCAATTGCAAAGTGCAATGCAAAAACAGAAAATTTGTCGTCGAAAATGTGAAAGTGACGGGACTGAAAACGCTGCTCGTCGGACTGAACGAAAACTACGGCGACGTGGCGTCCATCAAAAATGTGCAGATCAATGGGAAAACGGGCGCCGTTTGTTGCGAGTTCACCGGCAACAACCAGCAACAGGAGCCGAAATTGTTGCGCAGCTATGGCGTCGGCTCAGCGGGTGACGCAAAAAACTGCATCATTTCAGGCGCCAAAAGCGGCTGA
Protein sequence:
FVLCFFFSNLTPIFANWPTATGDETVSETIIIVGGIKDYKFKRLTASLTLGTGDQREGQKAIIRAEKGAVIKNLIIGENGADGIYCYDSCTLENVWFENVGEEGATFRTSNDCGAGSFVVTRGGARNAYDKVFQLNGGRQLTIRNFVCQNIGKLARSCGNCKVQCKNRKFVVENVKVTGLKTLLVGLNENYGDVASIKNVQINGKTGAVCCEFTGNNQQQEPKLLRSYGVGSAGDAKNCIISGAKSG
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
26583.2 247 8.84 -0.153 13.62
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.