Effector profile
| PlantPEAD ID: PlantPEAD35778 | Uniprot ID: A0A0P9M0W8 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 86840 | Pathogen type: Bacteria |
| Species: Pseudomonas cannabina | Strain: ICMP2823 | Other name: |
| Gene name: | NCBI Gene ID: LJPX01000194 | |
| Entry name: A0A0P9M0W8_PSECA | Protein name: Type III effector HopA1 | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCAGCGTCTCCTTAAAGGCGTATGTTCGACAAAACCGTCTGCCGGGATACCGCTCAGAGTTTTTAGTTCCTCCGCCAGTCGCGCGGCTGTTTCAAGATCGCCATTTATGTAAAGGATGGCGGAGTCTGTTCGTTTGCCATAATTGGCCGGGCCCGCGACTTTGCCTTGTGTCACGGATTTGTCTCTATCGATCAAAGTGACCATTGCGTGAGCCAGTTGGGCCGCATACTTGGGCTCCACGCCAATAGTGAGGCGCCCGGAATCTTTGCCAGGGTCGCGATCTTTCTTGGGCATGAGTCGGTAGAACCCATCTCTGGATTCAGGGCGTTCAGCCATGAATGCGTTCAAATCGAGTTCTTTGTTTCTGAGATGATCCTGACTCTGCGGGCGAATAATCAGTTGATTCTGTTCATTCAGAGCTTTCAGGGTATGCAGATAATTACTCTGCTGCCTCGTATTCATGGGCGTTGTGCCGGGCACGTCATCTTTGTACATCATGTAAACATGCTCCTCATCTTTGCGTCGAGCCTTTTGCGCGGCCTCCGCCCACTGTTGCAAGCTGGCAAATGTCTTTTTTGCCGACAACTGCGCTTCCGCCAATTTTATTGCGTTGGTAACCGAGCTAGTGTGCTGTTCGCGAA
Protein sequence:
REQHTSSVTNAIKLAEAQLSAKKTFASLQQWAEAAQKARRKDEEHVYMMYKDDVPGTTPMNTRQQSNYLHTLKALNEQNQLIIRPQSQDHLRNKELDLNAFMAERPESRDGFYRLMPKKDRDPGKDSGRLTIGVEPKYAAQLAHAMVTLIDRDKSVTQGKVAGPANYGKRTDSAILYINGDLETAARLAEELKTLSGIPADGFVEHTPLRRR
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 23931 | 212 | 9.32 | -0.814 | 45.62 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR040871
Pfam: PF17914
SMART:
KEGG:
PRINTS: