Effector profile
PlantPEAD ID: PlantPEAD35941 Uniprot ID: A0A0P9R7P6 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 86840 Pathogen type: Bacteria
Species: Pseudomonas cannabina Strain: ICMP2823 Other name:
Gene name: NCBI Gene ID: LJPX01000104
Entry name: A0A0P9R7P6_PSECA Protein name: Type III effector HopQ1-1
DOI:
Gene/Protein information
Gene sequence:
AGGCGTGTTCAACAAGCTTGAGTTGCATGACGTGCATGTGTCGCGTGGTCGGGATTACGCAATGAATTCGCTTCAGTCGAAGGAACATGCCAAATTTTTACTGGAAGGTCATGCTTTAAGGGCTGGACCTGGTGAAATACACCGCGACAGCTTGCAGGACATGAGCAGGCGCCTGGCCCGTGCGCCACATGGAGTCGGTATTGTCGTAATTGCAGGCATGAGTGATATCAATGCGCTCATCACTACCTGCCCAGATATGGTGCGCAAACGGGTTGATGACATCACCATCATGGGCGGCGTCGAGCCTTTAAAGGACGCAGATGGTTTTGTACAGCCTGATGCACGCGCTTACAACAATGCGACCGACATGGACGCTGCGCGCAGTCTTTATCG
Protein sequence:
GVFNKLELHDVHVSRGRDYAMNSLQSKEHAKFLLEGHALRAGPGEIHRDSLQDMSRRLARAPHGVGIVVIAGMSDINALITTCPDMVRKRVDDITIMGGVEPLKDADGFVQPDARAYNNATDMDAARSLYR
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
14424.4 131 6.65 -0.348 45.31
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.