Effector profile
| PlantPEAD ID: PlantPEAD35951 | Uniprot ID: A0A1E1M2J9 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 38038 | Pathogen type: Fungi |
| Species: Rhynchosporium secalis | Strain: | Other name: |
| Gene name: | NCBI Gene ID: FJVC01000120 | |
| Entry name: A0A1E1M2J9_RHYSE | Protein name: LysM domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TTATTCTGAAACAATCCTGTTCTTCTTGATCTTCCTGCTGGGCTGAACTGGCGCAGGGCAAGAACCAGAGGTAGGGTGGCAGAGAGTGATGTTGATGCGGTCGCCCGGGTAGATCTTGTTGAAGTCCGCGATTTGAGTGTTTGCCGCCTCAATGACCGCCAAGGTAATGCCAAACTTGGTTGCGATGGCAGAAAGGTAGTCTCCTTGGACTGCTGTGTAGACCGACTGGGAGCCATTGGCGCAATTGGGGGGGGAATTCTGAGCACAGGCTGGGACGTTAACCACGTCGCCTGGGAAGATGAGGTTCTTGTTCTTGATCTGAGGGTTCGCGGCCTCAAGCGCTTCCAAAGTAACTCCGAACCTCTCTGTCGCGAGGATGAAGAGTGTTTCTCCCTGTTGCACGATATACTTTGTAGGTCTGTTGACGTCGTTGCAGTCGACAGGTTTGCCAGGTGAAATAGTTCCGGCATCGCATGCTGGGTTCGGGATAGCGATCTTGTCACCAGGGAAGATAGCGTTCACATTCGCGATTTGACGGTTGACGAAGGCCACTTGAGCGACGGTGACGCCGTTGGCGGCTGATATGGCGCCGAGTGTATCACCCGATACGACGGTAACAGTATTCACAATGTTGCAGTTGTCCCCAGTTTTAGCGAGGACGCAGCTGGCAACTGCTAGGAGAGAAGCGGCGACACGCAT
Protein sequence:
MRVAASLLAVASCVLAKTGDNCNIVNTVTVVSGDTLGAISAANGVTVAQVAFVNRQIANVNAIFPGDKIAIPNPACDAGTISPGKPVDCNDVNRPTKYIVQQGETLFILATERFGVTLEALEAANPQIKNKNLIFPGDVVNVPACAQNSPPNCANGSQSVYTAVQGDYLSAIATKFGITLAVIEAANTQIADFNKIYPGDRINITLCHPTSGSCPAPVQPSRKIKKNRIVSE
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 24192.7 | 232 | 8.1 | 0.135 | 37.05 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR018392,IPR036779
Pfam: PF01476
SMART: SM00257
KEGG:
PRINTS: