Effector profile
| PlantPEAD ID: PlantPEAD35978 | Uniprot ID: A0A3M3LNE6 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 86840 | Pathogen type: Bacteria |
| Species: Pseudomonas cannabina | Strain: ICMP 2821 | Other name: |
| Gene name: | NCBI Gene ID: RBOW01000246 | |
| Entry name: A0A3M3LNE6_PSECA | Protein name: Type IV pilus bioproteinsis protein PilQ | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGAAGTGGGCAAGGCCAAGTATGCACAGTAGCGCTCAACGGAAATTGATCATGACCCGGATTCTCTCGATTATCGGCGCGTCGTTATGCATCGCGATGCTGTCGCCGGTTGTCCAGGCTGCCAACCTCAAGACCCTGGATGTCGCCGCGTTGCCGGGTGACCGGGTCGAACTCAAGCTGTCTTTCGACGGCCCGGTGCCTGCTCCGCGCGGTTACACCACAGCGCAACCGGCGCGCATTGCACTCGACCTGCCCGGTGTCACCAGCCAGCTGGCGACCAAAAGTCGTGAGCTGGGCACCGGTAACGCGCGCAGCGTGGTGGTGGTGCAGGCTCAGGATCGCACGCGTGTGATCATCAACCTGACGACACTGTCGCCTTACAGCTCGCGGGTCGACGGCAACAACCTGTTCGTGGTCATCGGTCAGGGCGCAGCCGCGGCCCAGGCGTCCCAGCCAAGCACTGCAATGGGCGCAGCCAGAGTGGCCGTGCCGCCGCCCACCCCGGCGTCCGCCAGGCCTTTTGTGCCGGCCGGTGCCAAAGCCATCAGGAATATCGATTTCCAGCGCGGTGAGCTGGGTGAAGGCAACGTGGTCATCGACCTGAGCAATGCCAACATTGCGCCTGACATTCAGGAGCAGGGCGGCAAGATCCGTGTCGACTTCGCCAAAACGATGCTGCCGGAACCCTTGCGCGTGCGCCTCGACGTCAAGGATTTCGCGACCCCGGTGCAGTTCGTCAGCGCGTCGGCCGCAGGTGACAAGGCAAGCATTCTGATCGAGCCGTCGGGCGCCTTTGACTATTCGGCGTTCCAGACCGAAAACAAGCTGACCATCAGTGTGCGCCCGCTGACTCACGAGGATATGGACCGGCGCGCCGCCGACAAGCCGGTGTACACCGGTGAAAAGCTCTCGCTGAATTTCCAGGACATCGATGTGCGCTCGGTGCTGCAGCTGATTGCCGACTTCACCAACCTCAATCTGGTGGCCAGTGACACGGTGCAGGGCGGTATCACCCTGCGTCTGCAGAATGTGCCGTGGGATCAGGCGCTGGATCTTGTGCTGAAAACCAAAGGGCTGGACAAACGCAAGGTTGGCAGCGTGCTGCTGGTCGCCCCGGCCGATGAAATTGCTGCCCGCGAACGTCAGGAACTGGAGTCGCTCAAGCAGATCGCCGAGCTGGCGCCGTTGCGTCGTGAGCTGTTGCAGGTCAATTACGCCAAGGCTGCCGACATCGCCAAGCTGTTCCAGTCGGTGACCAGTGCCGAGTCCAAGGCCGATGAGCGCGGTTCGATCACGGTTGATGACCGGACCAACAACATCATCGCTTACCAGACCCAAGATCGGCTCGACGAGTTGCGCCGTATTGTTTCGCAGCTGGACATTCCGGTGCGTCAGGTGATGATCGAAGCGCGCATCGTCGAGGCCAACGTCGATTACGACAAAGAGCTGGGTGTGCGCTGGGGTGGCGCGACCAACACCAGCGGCAGCAGCAACTGGTCGACGGGCACTGCAGCGGGCGGCTCCACGGCCAACAGCTCCACGTTCGTCGATATGGGCGCTGCCAACGCCACCTCCGGCATCGGCCTTGGCTTCCTGACCAACAACACGATGCTCGACCTTGAGCTGACGGCGATGGAAAAGACCGGCAACGGTGAGATCGTCTCGCAACCCAAGGTGGTCACGTCCGACAAGGAGACCGCCAAGATCCTCAAGGGCACCGAGGTTCCGTATCAGGAATCCAGCTCCAGTGGTGCAACCACAGTCAGCTTCAAGGAAGCCTCCCTGTCACTCGAAGTCACACCGCAGATCACCCCCGATAACCGCATCATCATGGAGGTCAAGGTCACCAAGGATGAGCCGGACTACGTGAATGCGGTGCTGGGTGTGCCGCCGATCAAGAAAAACGAAGTCAACGCCAAAGTGCTGATTTCCGACGGTGAAACCATTGTCATCGGTGGTGTGTTCTCGAATACGCAAAGTAAAAGTGTGGATAAAGTGCCATTTCTTGGCGATGTACCGTATCTTGGCCGGCTTTTCAGGCGCGATGTGGTATCCGAGTCCAAATCCGAGCTGTTGGTATTTCTGACTCCGCGTATCATGAACAACCAGGCGATTTCTGTGAGTCGTTGA
Protein sequence:
MKWARPSMHSSAQRKLIMTRILSIIGASLCIAMLSPVVQAANLKTLDVAALPGDRVELKLSFDGPVPAPRGYTTAQPARIALDLPGVTSQLATKSRELGTGNARSVVVVQAQDRTRVIINLTTLSPYSSRVDGNNLFVVIGQGAAAAQASQPSTAMGAARVAVPPPTPASARPFVPAGAKAIRNIDFQRGELGEGNVVIDLSNANIAPDIQEQGGKIRVDFAKTMLPEPLRVRLDVKDFATPVQFVSASAAGDKASILIEPSGAFDYSAFQTENKLTISVRPLTHEDMDRRAADKPVYTGEKLSLNFQDIDVRSVLQLIADFTNLNLVASDTVQGGITLRLQNVPWDQALDLVLKTKGLDKRKVGSVLLVAPADEIAARERQELESLKQIAELAPLRRELLQVNYAKAADIAKLFQSVTSAESKADERGSITVDDRTNNIIAYQTQDRLDELRRIVSQLDIPVRQVMIEARIVEANVDYDKELGVRWGGATNTSGSSNWSTGTAAGGSTANSSTFVDMGAANATSGIGLGFLTNNTMLDLELTAMEKTGNGEIVSQPKVVTSDKETAKILKGTEVPYQESSSSGATTVSFKEASLSLEVTPQITPDNRIIMEVKVTKDEPDYVNAVLGVPPIKKNEVNAKVLISDGETIVIGGVFSNTQSKSVDKVPFLGDVPYLGRLFRRDVVSESKSELLVFLTPRIMNNQAISVSR
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 76171.8 | 709 | 6.08 | -0.114 | 34.29 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR021731,IPR001775,IPR005644,IPR038591,IPR013355,IPR011662,IPR004846,IPR004845
Pfam: PF11741,PF00263,PF03958,PF07660
SMART: SM00965
KEGG:
PRINTS: PR00811