Effector profile
| PlantPEAD ID: PlantPEAD36058 | Uniprot ID: A0A7G4WI43 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 1642459 | Pathogen type: Oomycota |
| Species: Phytophthora agathidicida | Strain: 3770 | Other name: |
| Gene name: PaRXLR54 | NCBI Gene ID: MT503154 | |
| Entry name: A0A7G4WI43_9STRA | Protein name: PaRXLR54 | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCGTCTTCACTACATCGTCTTGCTGGGGGCCTCTGCCGTCTTCGCAAGTGCCAATGCGATTTCGATGGCAACTAAAGACGCGAAATCTTTCACTGTTCACGTTTCACCTCACTCAGTCGCCTCAAGCCGAAACATCGTATCTACTAACAGGTTCCTCAGGACGCACGAGTTGGCCGAAGTAGAAGAAGAGAGGGTGAATATCATGGGGATCTCCGCGGTTGACAAGTTCTCCAACTTTGCGGACGCGAAACTGGCTACGCTGTGGATGAAGAAAGGGGTAGACGCGGACGATGTTTTCATTAAATTGAAACTCCCTCAGACAGGCGACAAGATTCTAGAGAGCCCCAAGTTCTTTGTGTGGGCCAAGTACGTGAACGACTACAATGCCAAATTTCCTGACAAACAAGCGTCGACGATCCCGCTGTTAACGCACAACCTGGGTGGCGAGGCAAAGTTGGCAAAAGCACTCCTGGAAGCGACCAAGGTGGAGAGTACAAGATCCTTCGCCACGGCGTTGCAAACGGAGCAGCTCACGAGCTGGGTCCAAAAAAAATATAGCGCAGACAAGGTTTTCAAGGCACTCAATCTTAACAAAGGACTGGAGGGTCTGCCGTCTAACCCGTTGTTGAGCGTGTGGACGAGGTATGTCGATAAATTCAACCCCAGTGAGAAAACGACACTCTTCGCTACACTCCGAAACCACTATTCAGAGAAGACACTTTCCCAGTTCATCATTTCGACGGAGAAGGCGCCGCGTACGAAAGAGTGGGCCGCAGACTTGCAGAATCAGCGCTTTGACACTTGGTTGTTCAAACTCGAATCTCCGCAAGACGTTTTCAAGTTTCTCATGCTGGACGAGGGAAAGGTTTTCGGTAACCCGCAACTGACCACCTGGCTCAAATACGCCGCAGAGTTCAAGGCCGAGAACCCGTACGCGAGGGGTGCTGCCTTTATCGATGTATTAAGAGACAACTACAGCGACGCAGTTCTGGTTGGGATGATCACCGCCGCTAAAGAGAAATCCGGAACGAAAATACTGTCATCGTACGCAGAGCGCGAGCTCATCGGCAGGTGGGCGACTGAAAGACGGGCGCCAGCATACGTTTCGAAGGTGCTCGAGGCAACAGACGTGGATTACAAGAACTATTTGTTTGGCGAATACGTCAAGAAGTTCCGCCCAACGTCGTCTGATTAG
Protein sequence:
MRLHYIVLLGASAVFASANAISMATKDAKSFTVHVSPHSVASSRNIVSTNRFLRTHELAEVEEERVNIMGISAVDKFSNFADAKLATLWMKKGVDADDVFIKLKLPQTGDKILESPKFFVWAKYVNDYNAKFPDKQASTIPLLTHNLGGEAKLAKALLEATKVESTRSFATALQTEQLTSWVQKKYSADKVFKALNLNKGLEGLPSNPLLSVWTRYVDKFNPSEKTTLFATLRNHYSEKTLSQFIISTEKAPRTKEWAADLQNQRFDTWLFKLESPQDVFKFLMLDEGKVFGNPQLTTWLKYAAEFKAENPYARGAAFIDVLRDNYSDAVLVGMITAAKEKSGTKILSSYAERELIGRWATERRAPAYVSKVLEATDVDYKNYLFGEYVKKFRPTSSD
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 44882.3 | 398 | 9.26 | -0.3 | 30.74 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: