Effector profile
| PlantPEAD ID: PlantPEAD36835 | Uniprot ID: Q3LUD8 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 97005 | Pathogen type: Nematoda |
| Species: Heterodera schachtii | Strain: | Other name: Sugarbeet cyst nematode, Tylenchus schachtii |
| Gene name: | NCBI Gene ID: DQ176598 | |
| Entry name: Q3LUD8_HETSC | Protein name: Chorismate mutase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
AAGAAAATGGAAACGGCATTCGAATTTGTGGTCGGAATGAATGGCCAAATGGAGGACAAAACGACGCCCGGGGTAAATGCTAATGGGGCATTTTTGTGCTGTAAGGCAACCCAAGAAACCGCGACACTTTTCATCGTCGGCGTGGCCAACAAACGGCTGATGTTGGCCAAGGACGTGGTCAATTACAAATTTCATCGCAACAGCTCTATCGATGATTTTGTACGAGAGAAGCAAGTGTTGGAAAGTGTGTCGGCGCAGGGACAAAAAGCCGGCATTGGGGGCAATTATGGAGAAGAATTCTTCCAGGACCAAATGGACGCCAACAAAATGATTCAGAAAGGCTACGTGAAGCTGTGGACCGCCAACAAATCGTTGCTTCCTCAAAATGTGCCGGATTTACAGAAAAATACCCGGCCCAGAGTGACGGCGGCGACAGAAGAAATGATTTTGGCACTGAAAGTGTTTCTACAGTTTCGAATCAACAAAAATTGTTGGACATTTGTGAAAACGGAGGCCGAAAAGCCGAAAAGCTTTTTGAGTTTGGCCGAACCCAACGGAAAGGACGCAATGCGAAAAGCGGTGGTGCGATTGTGCGCAGAAGTGGAA
Protein sequence:
KKMETAFEFVVGMNGQMEDKTTPGVNANGAFLCCKATQETATLFIVGVANKRLMLAKDVVNYKFHRNSSIDDFVREKQVLESVSAQGQKAGIGGNYGEEFFQDQMDANKMIQKGYVKLWTANKSLLPQNVPDLQKNTRPRVTAATEEMILALKVFLQFRINKNCWTFVKTEAEKPKSFLSLAEPNGKDAMRKAVVRLCAEVE
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 22652.2 | 202 | 9.11 | -0.35 | 29.45 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR036263,IPR008240,IPR036979,IPR002701
Pfam: PF01817
SMART: SM00830
KEGG:
PRINTS: